Variant report

Variant rs16942475
Chromosome Location chr17:46688371-46688372
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46683600-46691000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
2 chr17:46687000-46688600 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
3 chr17:46687000-46689000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr17:46687000-46689000 Active TSS Fetal Kidney kidney
5 chr17:46687000-46690400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
6 chr17:46687000-46691600 Active TSS HSMMtube muscle
7 chr17:46687200-46688600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
8 chr17:46687200-46688600 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
9 chr17:46687200-46688600 Active TSS NHLF lung
10 chr17:46687200-46688800 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
11 chr17:46687200-46689000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
12 chr17:46687200-46689000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
13 chr17:46687200-46689200 Active TSS Right Atrium heart
14 chr17:46687200-46689200 Active TSS Hela-S3 cervix
15 chr17:46687200-46689200 Active TSS HSMM muscle
16 chr17:46687200-46689600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
17 chr17:46687200-46690400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
18 chr17:46687200-46692800 Active TSS NHDF-Ad bronchial
19 chr17:46687400-46688400 Flanking Bivalent TSS/Enh HepG2 liver
20 chr17:46687400-46688600 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
21 chr17:46687400-46688600 Active TSS Small Intestine intestine
22 chr17:46687400-46688800 Flanking Bivalent TSS/Enh Thymus Thymus
23 chr17:46687400-46689000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
24 chr17:46687400-46689000 Active TSS Aorta Aorta
25 chr17:46687400-46689000 Bivalent/Poised TSS Colon Smooth Muscle Colon
26 chr17:46687400-46689000 Flanking Bivalent TSS/Enh Placenta Placenta
27 chr17:46687400-46689000 Active TSS Rectal Smooth Muscle rectum
28 chr17:46687400-46689200 Bivalent/Poised TSS Fetal Lung lung
29 chr17:46687400-46689200 Active TSS Rectal Mucosa Donor 29 rectum
30 chr17:46687400-46689200 Active TSS Sigmoid Colon Sigmoid Colon
31 chr17:46687400-46689200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
32 chr17:46687400-46689400 Flanking Bivalent TSS/Enh Primary B cells from peripheral blood blood
33 chr17:46687400-46690200 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
34 chr17:46687400-46691000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr17:46687400-46692400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr17:46687400-46692400 Active TSS A549 lung
37 chr17:46687400-46692800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr17:46687600-46688400 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
39 chr17:46687600-46688600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr17:46687600-46688600 Active TSS Muscle Satellite Cultured Cells --
41 chr17:46687600-46688600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr17:46687600-46688600 Flanking Bivalent TSS/Enh HMEC breast
43 chr17:46687600-46688800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr17:46687600-46688800 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood
45 chr17:46687600-46688800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
46 chr17:46687600-46688800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr17:46687600-46688800 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
48 chr17:46687600-46689000 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
49 chr17:46687600-46689000 Bivalent/Poised TSS Fetal Brain Female brain
50 chr17:46687600-46689000 Flanking Bivalent TSS/Enh Fetal Thymus thymus

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