Variant report

Variant rs16945692
Chromosome Location chr17:59940244-59940245
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59912400-59940400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr17:59933400-59940400 Weak transcription Pancreas Pancrea
3 chr17:59938400-59941400 Active TSS GM12878-XiMat blood
4 chr17:59938600-59940400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr17:59938600-59941400 Active TSS Brain Germinal Matrix brain
6 chr17:59938800-59940400 Flanking Active TSS Muscle Satellite Cultured Cells --
7 chr17:59938800-59940600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr17:59938800-59940600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr17:59939000-59940400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr17:59939000-59940400 Flanking Active TSS HUVEC blood vessel
11 chr17:59939000-59941600 Active TSS H1 Cell Line embryonic stem cell
12 chr17:59939000-59941600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
13 chr17:59939000-59941600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
14 chr17:59939200-59940400 Flanking Active TSS Duodenum Mucosa Duodenum
15 chr17:59939200-59941600 Active TSS Fetal Thymus thymus
16 chr17:59939200-59941800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr17:59939200-59941800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr17:59939400-59940400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:59939400-59940400 Flanking Active TSS Fetal Heart heart
20 chr17:59939400-59941600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
21 chr17:59939400-59941600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr17:59939400-59941600 Active TSS Fetal Intestine Large intestine
23 chr17:59939400-59941800 Active TSS ES-I3 Cell Line embryonic stem cell
24 chr17:59939400-59941800 Active TSS iPS-20b Cell Line embryonic stem cell
25 chr17:59939400-59941800 Active TSS Fetal Kidney kidney
26 chr17:59939600-59940400 Flanking Active TSS Primary hematopoietic stem cells blood
27 chr17:59939600-59940400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
28 chr17:59939600-59941200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr17:59939600-59941200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr17:59939600-59941400 Active TSS Hela-S3 cervix
31 chr17:59939600-59941600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr17:59939600-59941600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr17:59939600-59941800 Active TSS HUES64 Cell Line embryonic stem cell
34 chr17:59939800-59940400 Flanking Active TSS Primary T cells from cord blood blood
35 chr17:59939800-59940400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
36 chr17:59939800-59940400 Active TSS HepG2 liver
37 chr17:59939800-59941200 Active TSS NHEK skin
38 chr17:59939800-59941400 Active TSS ES-WA7 Cell Line embryonic stem cell
39 chr17:59939800-59941400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr17:59939800-59941400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr17:59939800-59941600 Active TSS H9 Cell Line embryonic stem cell
42 chr17:59939800-59941600 Active TSS iPS-15b Cell Line embryonic stem cell
43 chr17:59939800-59941600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr17:59939800-59941600 Active TSS Thymus Thymus
45 chr17:59939800-59941600 Active TSS NHLF lung
46 chr17:59939800-59941800 Active TSS HUES48 Cell Line embryonic stem cell
47 chr17:59939800-59941800 Active TSS HUES6 Cell Line embryonic stem cell
48 chr17:59940000-59940400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr17:59940000-59940400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr17:59940000-59940400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood

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