Variant report

Variant	rs16946874
Chromosome Location	chr15:92957154-92957155
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948621	chr15:92688981-93158095	Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv1049561	chr15:92758434-93097965	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv1037972	chr15:92804908-93270761	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
4	nsv904499	chr15:92914795-93472582	Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	163 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92942800-92958000	Weak transcription	Left Ventricle	heart
2	chr15:92950000-92957200	Weak transcription	Fetal Stomach	stomach
3	chr15:92951600-92957600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr15:92953200-92962200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr15:92953200-92963600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr15:92953200-92969000	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr15:92953400-92997800	Weak transcription	Fetal Brain Male	brain
8	chr15:92955200-92961000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr15:92955600-92961200	Enhancers	NHDF-Ad	bronchial
10	chr15:92955600-92966800	Strong transcription	Brain Germinal Matrix	brain
11	chr15:92956200-92959200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr15:92956400-92957200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr15:92956400-92957400	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr15:92956400-92957400	Genic enhancers	HSMMtube	muscle
15	chr15:92956400-92957600	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr15:92956400-92957600	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr15:92956400-92957600	Enhancers	HSMM	muscle
18	chr15:92956600-92957200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr15:92956600-92957200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr15:92956600-92957800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr15:92956600-92963000	Strong transcription	Fetal Brain Female	brain
22	chr15:92956800-92957200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr15:92956800-92957800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr15:92956800-92958200	Genic enhancers	Fetal Muscle Trunk	muscle
25	chr15:92956800-92963600	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr15:92957000-92957200	Enhancers	Fetal Muscle Leg	muscle
27	chr15:92957000-92959000	Enhancers	Fetal Heart	heart

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