Variant report

Variant	rs1695022
Chromosome Location	chr12:63338172-63338173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs1146098	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1249934	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1250153	0.91[LWK][hapmap];0.83[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs699590	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3415227	chr12:63228121-63591615	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63329600-63338600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr12:63335400-63338600	Weak transcription	Brain Substantia Nigra	brain
3	chr12:63338000-63338200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:63338000-63338800	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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