Variant report

Variant rs16951428
Chromosome Location chr17:15280985-15280986
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15280000-15282200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr17:15280200-15281000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr17:15280200-15281000 Enhancers Brain Angular Gyrus brain
4 chr17:15280200-15281200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr17:15280200-15281200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr17:15280200-15281200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr17:15280200-15281200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr17:15280200-15281200 Flanking Active TSS Muscle Satellite Cultured Cells --
9 chr17:15280200-15281200 Enhancers Pancreas Pancrea
10 chr17:15280200-15281200 Enhancers NHLF lung
11 chr17:15280200-15281200 Flanking Active TSS Osteobl bone
12 chr17:15280200-15281400 Enhancers HMEC breast
13 chr17:15280200-15282000 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr17:15280200-15282200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr17:15280200-15282400 Enhancers Fetal Intestine Small intestine
16 chr17:15280400-15281200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr17:15280400-15281200 Flanking Active TSS Brain Hippocampus Middle brain
18 chr17:15280400-15281200 Enhancers Fetal Muscle Leg muscle
19 chr17:15280400-15281200 Enhancers Placenta Placenta
20 chr17:15280400-15281400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr17:15280600-15281000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr17:15280600-15281000 Active TSS Brain Cingulate Gyrus brain
23 chr17:15280600-15281200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr17:15280600-15281200 Enhancers Fetal Lung lung
25 chr17:15280600-15281400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
26 chr17:15280600-15287000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr17:15280800-15281000 Enhancers Rectal Mucosa Donor 29 rectum
28 chr17:15280800-15281000 Flanking Active TSS HSMMtube muscle
29 chr17:15280800-15281000 Flanking Active TSS NHDF-Ad bronchial
30 chr17:15280800-15281200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:15280800-15281200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr17:15280800-15281200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
33 chr17:15280800-15281200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr17:15280800-15281200 Flanking Active TSS Adipose Nuclei Adipose
35 chr17:15280800-15281200 Active TSS Brain Anterior Caudate brain
36 chr17:15280800-15281200 Flanking Active TSS Brain Inferior Temporal Lobe brain
37 chr17:15280800-15281200 Active TSS Brain Substantia Nigra brain
38 chr17:15280800-15281200 Flanking Active TSS Colon Smooth Muscle Colon
39 chr17:15280800-15281200 Flanking Active TSS Fetal Intestine Large intestine
40 chr17:15280800-15281200 Flanking Active TSS Fetal Kidney kidney
41 chr17:15280800-15281200 Flanking Active TSS Ovary ovary
42 chr17:15280800-15281200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr17:15280800-15281200 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr17:15280800-15281200 Flanking Active TSS HSMM muscle
45 chr17:15280800-15281200 Flanking Active TSS NH-A brain
46 chr17:15280800-15281400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr17:15280800-15281400 Flanking Active TSS HepG2 liver

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