Variant report

Variant	rs16955978
Chromosome Location	chr17:46448831-46448832
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:46124291..46126401-chr17:46446080..46448897,2	K562	blood:

Variant related genes	Relation type
ENSG00000082641	Chromatin interaction
ENSG00000263412	Chromatin interaction

rs_ID	r²[population]
rs10514937	1.00[AFR][1000 genomes]
rs10514943	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46414600-46450400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr17:46423400-46451200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr17:46423600-46453800	Weak transcription	Fetal Thymus	thymus
4	chr17:46436200-46450000	Weak transcription	Primary B cells from peripheral blood	blood
5	chr17:46437200-46450600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr17:46438400-46471800	Weak transcription	Thymus	Thymus
7	chr17:46440000-46449400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr17:46441000-46451400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr17:46442800-46450400	Weak transcription	Primary B cells from cord blood	blood
10	chr17:46444400-46451400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr17:46445200-46451000	Weak transcription	Primary T cells from cord blood	blood
12	chr17:46445600-46449400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr17:46445800-46450400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr17:46445800-46451000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr17:46445800-46453000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr17:46446000-46451000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
17	chr17:46446200-46451800	Weak transcription	GM12878-XiMat	blood
18	chr17:46446400-46450200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr17:46446400-46450600	Weak transcription	K562	blood
20	chr17:46447600-46452200	Genic enhancers	Primary T cells fromperipheralblood	blood
21	chr17:46448600-46449400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr17:46448800-46450000	Weak transcription	Primary T helper cells PMA-I stimulated	--
23	chr17:46448800-46450200	Weak transcription	Primary T helper cells fromperipheralblood	blood

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