Variant report

Variant rs16976917
Chromosome Location chr15:56756575-56756576
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56716000-56756600 Weak transcription HSMM muscle
2 chr15:56723400-56756600 Weak transcription Fetal Stomach stomach
3 chr15:56732200-56756800 Weak transcription Fetal Brain Male brain
4 chr15:56735400-56756600 Weak transcription Brain Inferior Temporal Lobe brain
5 chr15:56735600-56756600 Weak transcription Brain Anterior Caudate brain
6 chr15:56739600-56756600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr15:56743200-56756800 Weak transcription Aorta Aorta
8 chr15:56744600-56757200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:56747200-56756800 Weak transcription Stomach Mucosa stomach
10 chr15:56748000-56756800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr15:56748600-56756800 Weak transcription Pancreas Pancrea
12 chr15:56751000-56756600 Weak transcription GM12878-XiMat blood
13 chr15:56751600-56756600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr15:56754000-56756600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr15:56754200-56756600 Weak transcription NH-A brain
16 chr15:56754600-56756600 Weak transcription NHLF lung
17 chr15:56755600-56756600 Enhancers Fetal Thymus thymus
18 chr15:56755800-56756600 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr15:56756000-56756800 Flanking Active TSS Dnd41 blood
20 chr15:56756000-56757000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr15:56756000-56757800 Active TSS Pancreatic Islets Pancreatic Islet
22 chr15:56756200-56756600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:56756200-56756600 Enhancers Duodenum Mucosa Duodenum
24 chr15:56756200-56756600 Enhancers Osteobl bone
25 chr15:56756200-56757000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr15:56756200-56757800 Active TSS Muscle Satellite Cultured Cells --
27 chr15:56756200-56757800 Active TSS K562 blood
28 chr15:56756200-56758000 Active TSS Fetal Kidney kidney
29 chr15:56756400-56756600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr15:56756400-56756600 Enhancers Primary B cells from cord blood blood
31 chr15:56756400-56756600 Enhancers Primary hematopoietic stem cells blood
32 chr15:56756400-56756600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr15:56756400-56756600 Enhancers Cortex derived primary cultured neurospheres brain
34 chr15:56756400-56756600 Enhancers Adipose Nuclei Adipose
35 chr15:56756400-56756600 Enhancers Brain Cingulate Gyrus brain
36 chr15:56756400-56756600 Enhancers Fetal Brain Female brain
37 chr15:56756400-56756600 Enhancers Fetal Heart heart
38 chr15:56756400-56756600 Enhancers Fetal Muscle Leg muscle
39 chr15:56756400-56756600 Enhancers Rectal Mucosa Donor 29 rectum
40 chr15:56756400-56756600 Enhancers Rectal Mucosa Donor 31 rectum
41 chr15:56756400-56756600 Enhancers HepG2 liver
42 chr15:56756400-56756600 Enhancers Monocytes-CD14+_RO01746 blood
43 chr15:56756400-56756800 Active TSS iPS-20b Cell Line embryonic stem cell
44 chr15:56756400-56756800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr15:56756400-56756800 Flanking Active TSS Fetal Lung lung
46 chr15:56756400-56757400 Active TSS Primary hematopoietic stem cells short term culture blood
47 chr15:56756400-56758000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr15:56756400-56758000 Active TSS A549 lung

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