Variant report

Variant rs16977452
Chromosome Location chr15:57680662-57680663
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57674200-57680800 Enhancers Liver Liver
2 chr15:57675600-57680800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr15:57676000-57681000 Enhancers Colon Smooth Muscle Colon
4 chr15:57676000-57681000 Enhancers Fetal Stomach stomach
5 chr15:57676000-57687600 Weak transcription Right Atrium heart
6 chr15:57676400-57680800 Enhancers HUVEC blood vessel
7 chr15:57676400-57681200 Enhancers Fetal Lung lung
8 chr15:57676800-57682800 Weak transcription Esophagus oesophagus
9 chr15:57677000-57681000 Enhancers Fetal Kidney kidney
10 chr15:57677800-57681000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
11 chr15:57677800-57681400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
12 chr15:57677800-57681600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
13 chr15:57678000-57681000 Flanking Active TSS H1 Cell Line embryonic stem cell
14 chr15:57678000-57681000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
15 chr15:57678000-57681400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
16 chr15:57678200-57681200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr15:57678400-57681000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr15:57678800-57680800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr15:57678800-57681000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr15:57678800-57681200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr15:57679000-57680800 Enhancers Rectal Smooth Muscle rectum
22 chr15:57679000-57681200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr15:57679000-57681800 Enhancers Stomach Smooth Muscle stomach
24 chr15:57679000-57682400 Weak transcription Brain Anterior Caudate brain
25 chr15:57679000-57684800 Weak transcription Brain Substantia Nigra brain
26 chr15:57679000-57694400 Weak transcription Ovary ovary
27 chr15:57679400-57680800 Enhancers Cortex derived primary cultured neurospheres brain
28 chr15:57679400-57680800 Enhancers Brain Cingulate Gyrus brain
29 chr15:57679400-57680800 Enhancers Fetal Muscle Leg muscle
30 chr15:57679400-57681200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr15:57679400-57681800 Enhancers Duodenum Smooth Muscle Duodenum
32 chr15:57679400-57682800 Weak transcription Brain Hippocampus Middle brain
33 chr15:57679800-57680800 Active TSS H9 Cell Line embryonic stem cell
34 chr15:57680000-57680800 Enhancers Left Ventricle heart
35 chr15:57680000-57680800 Enhancers Pancreas Pancrea
36 chr15:57680000-57681000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr15:57680200-57680800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
38 chr15:57680200-57680800 Enhancers Brain Inferior Temporal Lobe brain
39 chr15:57680200-57680800 Enhancers Gastric stomach
40 chr15:57680200-57681000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
41 chr15:57680200-57681000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
42 chr15:57680200-57681000 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr15:57680200-57695200 Weak transcription Fetal Muscle Trunk muscle
44 chr15:57680400-57682400 Weak transcription HepG2 liver
45 chr15:57680400-57682800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr15:57680400-57682800 Weak transcription Lung lung
47 chr15:57680600-57680800 Flanking Active TSS Fetal Heart heart
48 chr15:57680600-57681000 Weak transcription Right Ventricle heart
49 chr15:57680600-57681600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell

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