Variant report

Variant	rs16997151
Chromosome Location	chr4:111215636-111215637
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10010721	0.91[ASN][1000 genomes]
rs13340294	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28404460	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28805390	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs420932	0.84[YRI][hapmap]
rs7699694	1.00[EUR][1000 genomes]
rs9990445	1.00[ASN][1000 genomes]
rs9992732	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869392	chr4:110945459-111235071	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:111214600-111217600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:111215400-111215800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:111215400-111215800	Enhancers	Osteobl	bone
4	chr4:111215600-111215800	Enhancers	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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