Variant report

Variant rs17001622
Chromosome Location chr4:77119218-77119219
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77097600-77119600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr4:77113200-77134000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:77113600-77134200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr4:77113800-77119400 Weak transcription H9 Cell Line embryonic stem cell
5 chr4:77114200-77122400 Enhancers Right Ventricle heart
6 chr4:77114600-77119400 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr4:77114600-77121000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr4:77114600-77122000 Enhancers HMEC breast
9 chr4:77114800-77122800 Enhancers Psoas Muscle Psoas
10 chr4:77115200-77119400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr4:77115200-77122200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr4:77115400-77119400 Weak transcription Placenta Amnion Placenta Amnion
13 chr4:77115400-77119400 Enhancers NHLF lung
14 chr4:77115400-77122600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr4:77115600-77119400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr4:77115600-77120800 Enhancers Adipose Nuclei Adipose
17 chr4:77116200-77119600 Enhancers Brain Angular Gyrus brain
18 chr4:77116200-77122400 Enhancers Pancreas Pancrea
19 chr4:77116200-77122400 Enhancers Right Atrium heart
20 chr4:77116400-77119400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr4:77116600-77122600 Enhancers Fetal Thymus thymus
22 chr4:77116800-77119400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr4:77116800-77119400 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr4:77116800-77122200 Enhancers Primary B cells from peripheral blood blood
25 chr4:77117000-77119400 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr4:77117000-77119400 Weak transcription NHEK skin
27 chr4:77117000-77120000 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr4:77117000-77122800 Enhancers Small Intestine intestine
29 chr4:77117000-77134000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr4:77117200-77121400 Enhancers Spleen Spleen
31 chr4:77117200-77129200 Enhancers Liver Liver
32 chr4:77117400-77119600 Enhancers Skeletal Muscle Male skeletal muscle
33 chr4:77117400-77122600 Enhancers Thymus Thymus
34 chr4:77117400-77132800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr4:77117600-77119400 Enhancers Rectal Mucosa Donor 31 rectum
36 chr4:77117600-77121000 Enhancers Primary hematopoietic stem cells blood
37 chr4:77117800-77119800 Enhancers Fetal Kidney kidney
38 chr4:77117800-77120000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:77117800-77122200 Enhancers NHDF-Ad bronchial
40 chr4:77117800-77122400 Enhancers Left Ventricle heart
41 chr4:77117800-77122800 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr4:77118000-77119400 Enhancers Pancreatic Islets Pancreatic Islet
43 chr4:77118000-77119800 Enhancers Colonic Mucosa Colon
44 chr4:77118000-77120400 Flanking Active TSS Brain Cingulate Gyrus brain
45 chr4:77118000-77120400 Flanking Active TSS GM12878-XiMat blood
46 chr4:77118000-77121400 Enhancers Aorta Aorta
47 chr4:77118000-77122000 Enhancers Sigmoid Colon Sigmoid Colon
48 chr4:77118000-77122400 Enhancers Fetal Heart heart
49 chr4:77118200-77119400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr4:77118200-77119400 Weak transcription HepG2 liver

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