Variant report

Variant rs17010042
Chromosome Location chr1:221612756-221612757
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:221604800-221612800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:221605800-221613600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:221606200-221613400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:221608200-221615000 Enhancers Hela-S3 cervix
5 chr1:221608600-221612800 Weak transcription Rectal Smooth Muscle rectum
6 chr1:221608600-221613800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:221609000-221613800 Enhancers Osteobl bone
8 chr1:221609200-221612800 Weak transcription NHLF lung
9 chr1:221609200-221613400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:221609400-221612800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:221609400-221613000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr1:221609400-221613000 Weak transcription Colon Smooth Muscle Colon
13 chr1:221609600-221612800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:221609600-221613400 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr1:221609800-221613000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:221610600-221612800 Weak transcription Fetal Lung lung
17 chr1:221611000-221613800 Enhancers NH-A brain
18 chr1:221611000-221615000 Enhancers HSMM muscle
19 chr1:221611200-221615000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:221611400-221613600 Enhancers NHEK skin
21 chr1:221611400-221613800 Enhancers NHDF-Ad bronchial
22 chr1:221611400-221614000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:221611400-221615000 Enhancers HUVEC blood vessel
24 chr1:221611400-221615800 Enhancers HMEC breast
25 chr1:221612000-221612800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:221612000-221612800 Enhancers A549 lung
27 chr1:221612000-221614000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:221612200-221612800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:221612200-221612800 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:221612200-221613800 Enhancers GM12878-XiMat blood
31 chr1:221612200-221614200 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:221612200-221614400 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr1:221612400-221613600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:221612400-221613800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:221612400-221614600 Enhancers Fetal Heart heart
36 chr1:221612600-221613000 Enhancers Primary hematopoietic stem cells blood
37 chr1:221612600-221613000 Enhancers Muscle Satellite Cultured Cells --
38 chr1:221612600-221613200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:221612600-221613400 Enhancers Primary T cells from cord blood blood
40 chr1:221612600-221614000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr1:221612600-221614000 Enhancers Primary T regulatory cells fromperipheralblood blood
42 chr1:221612600-221614200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:221612600-221614400 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr1:221612600-221615800 Enhancers HSMMtube muscle

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