Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:221732770..221734353-chr1:221737338..221739600,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv997685	chr1:220993527-221863416	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv535299	chr1:220993527-221863416	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv873200	chr1:221644180-221843191	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv1009838	chr1:221692621-221773945	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv535301	chr1:221692621-221773945	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:221729800-221748600	Weak transcription	Left Ventricle	heart
2	chr1:221729800-221748800	Weak transcription	Pancreas	Pancrea
3	chr1:221737000-221741200	Weak transcription	Psoas Muscle	Psoas
4	chr1:221737000-221741600	Enhancers	Fetal Heart	heart
5	chr1:221737200-221741200	Weak transcription	Ovary	ovary
6	chr1:221737200-221741200	Weak transcription	Right Atrium	heart
7	chr1:221737200-221741600	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr1:221737400-221740600	Weak transcription	Liver	Liver
9	chr1:221738600-221739400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr1:221738600-221739400	Enhancers	HSMM	muscle
11	chr1:221738800-221739200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr1:221738800-221739200	Enhancers	HSMMtube	muscle
13	chr1:221738800-221739400	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr1:221738800-221739400	Enhancers	Adipose Nuclei	Adipose
15	chr1:221738800-221741400	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr1:221739000-221739400	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr1:221739000-221739600	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr1:221739000-221739600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr1:221739000-221739600	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr1:221739000-221740000	Enhancers	ES-I3 Cell Line	embryonic stem cell

Quick Search: