Variant report

Variant	rs17012048
Chromosome Location	chr2:76245605-76245606
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11126493	0.86[ASN][1000 genomes]
rs12613257	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12614847	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1404086	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs317235	0.84[ASN][1000 genomes]
rs317236	0.85[ASN][1000 genomes]
rs3843860	0.86[ASN][1000 genomes]
rs3843861	0.86[ASN][1000 genomes]
rs3849395	0.86[ASN][1000 genomes]
rs3849396	0.85[ASN][1000 genomes]
rs3910651	0.86[ASN][1000 genomes]
rs441584	0.85[ASN][1000 genomes]
rs4853190	0.86[ASN][1000 genomes]
rs62150799	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76244200-76245800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr2:76244600-76246200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:76245200-76246200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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