Variant report

Variant rs17012452
Chromosome Location chr2:33239246-33239247
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33218200-33241000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:33226600-33240800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:33231000-33240000 Weak transcription Pancreas Pancrea
4 chr2:33234600-33239400 Weak transcription K562 blood
5 chr2:33236000-33240000 Enhancers Cortex derived primary cultured neurospheres brain
6 chr2:33236800-33239400 Weak transcription HepG2 liver
7 chr2:33236800-33239800 Enhancers HUVEC blood vessel
8 chr2:33237000-33239600 Enhancers Fetal Heart heart
9 chr2:33237200-33241200 Weak transcription Right Ventricle heart
10 chr2:33237600-33240800 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:33237600-33246000 Weak transcription Brain Germinal Matrix brain
12 chr2:33238400-33239800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr2:33238400-33239800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr2:33238600-33239600 Enhancers HUES48 Cell Line embryonic stem cell
15 chr2:33238600-33239600 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr2:33238600-33239600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr2:33238600-33239800 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr2:33238600-33239800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:33238600-33239800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr2:33238600-33239800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr2:33238600-33239800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:33238600-33239800 Enhancers HUES6 Cell Line embryonic stem cell
23 chr2:33238600-33239800 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr2:33238600-33240000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr2:33238800-33239600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:33238800-33239600 Enhancers Sigmoid Colon Sigmoid Colon
27 chr2:33238800-33239600 Enhancers Thymus Thymus
28 chr2:33238800-33239800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:33238800-33239800 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr2:33238800-33240000 Enhancers NH-A brain
31 chr2:33238800-33240200 Enhancers NHEK skin
32 chr2:33238800-33240600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:33238800-33240600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr2:33238800-33240600 Flanking Active TSS A549 lung
35 chr2:33238800-33240600 Enhancers HMEC breast
36 chr2:33238800-33240800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:33238800-33241200 Enhancers Psoas Muscle Psoas
38 chr2:33238800-33241400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:33238800-33241400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:33238800-33241400 Enhancers Left Ventricle heart
41 chr2:33238800-33241400 Enhancers Right Atrium heart
42 chr2:33238800-33241400 Enhancers NHDF-Ad bronchial
43 chr2:33238800-33241600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:33238800-33241600 Enhancers Fetal Intestine Small intestine
45 chr2:33238800-33241600 Enhancers Rectal Mucosa Donor 31 rectum
46 chr2:33238800-33241600 Enhancers Osteobl bone
47 chr2:33238800-33241800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:33238800-33241800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr2:33238800-33241800 Enhancers Fetal Muscle Leg muscle
50 chr2:33238800-33241800 Enhancers Stomach Mucosa stomach

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