The 2.0 version of rSNPBase

Variant report

Variant rs17017384
Chromosome Location chr1:211485227-211485228
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211434400-211487000 Weak transcription Gastric stomach
2 chr1:211444800-211491200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:211445800-211486800 Weak transcription Esophagus oesophagus
4 chr1:211447800-211486200 Weak transcription Stomach Mucosa stomach
5 chr1:211455000-211486800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:211456600-211486000 Weak transcription Small Intestine intestine
7 chr1:211461200-211499600 Weak transcription Psoas Muscle Psoas
8 chr1:211461400-211499600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:211461600-211499600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:211465600-211486800 Weak transcription Pancreas Pancrea
11 chr1:211465800-211486800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:211466200-211485800 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:211466800-211486000 Weak transcription Aorta Aorta
14 chr1:211467000-211486800 Weak transcription Spleen Spleen
15 chr1:211467200-211486600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:211467200-211493800 Weak transcription Fetal Brain Male brain
17 chr1:211467400-211485600 Weak transcription Brain Angular Gyrus brain
18 chr1:211467600-211486000 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:211467800-211486200 Weak transcription Brain Substantia Nigra brain
20 chr1:211467800-211494200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:211468000-211485800 Weak transcription Colon Smooth Muscle Colon
22 chr1:211469400-211485600 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:211470000-211486000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:211472000-211485600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:211472000-211486600 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:211472000-211487000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:211473800-211486000 Weak transcription Lung lung
28 chr1:211473800-211486600 Weak transcription Fetal Intestine Small intestine
29 chr1:211473800-211486600 Weak transcription Fetal Stomach stomach
30 chr1:211474200-211486200 Weak transcription Colonic Mucosa Colon
31 chr1:211474400-211485600 Weak transcription Ovary ovary
32 chr1:211474400-211486000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:211474400-211486200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:211474800-211486200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:211474800-211497000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr1:211475800-211485600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr1:211476800-211485600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:211477000-211485600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:211477200-211485600 Weak transcription Brain Hippocampus Middle brain
40 chr1:211477200-211485800 Weak transcription HSMMtube muscle
41 chr1:211477600-211485600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:211477600-211486000 Weak transcription Brain Germinal Matrix brain
43 chr1:211477800-211485400 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr1:211477800-211485800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr1:211477800-211486400 Weak transcription HMEC breast
46 chr1:211478200-211485600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:211478200-211485600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:211478400-211485600 Weak transcription Stomach Smooth Muscle stomach
49 chr1:211478600-211485400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:211478600-211485600 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015