The 2.0 version of rSNPBase

Variant report

Variant rs17017912
Chromosome Location chr1:211846160-211846161
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211827600-211847600 Weak transcription HSMM muscle
2 chr1:211827600-211847600 Weak transcription NHEK skin
3 chr1:211828600-211847600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr1:211828600-211847600 Weak transcription Brain Germinal Matrix brain
5 chr1:211828600-211847800 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:211828600-211847800 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:211828600-211848000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:211828600-211848000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:211828800-211847600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:211829000-211847400 Weak transcription Duodenum Mucosa Duodenum
11 chr1:211829000-211847800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:211829600-211848600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:211832400-211847600 Weak transcription Primary B cells from cord blood blood
14 chr1:211833200-211847800 Weak transcription Fetal Intestine Small intestine
15 chr1:211833800-211847000 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr1:211835200-211846400 Strong transcription Fetal Thymus thymus
17 chr1:211835400-211847400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:211836600-211846800 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:211837200-211848000 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:211837400-211848000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:211837600-211846800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:211837600-211847000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:211837600-211847600 Weak transcription Fetal Kidney kidney
24 chr1:211838400-211848000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:211841000-211847600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:211841000-211848400 Weak transcription Stomach Mucosa stomach
27 chr1:211841400-211848200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:211841600-211848000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:211841800-211847000 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr1:211842000-211848400 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:211843200-211847600 Weak transcription Fetal Brain Female brain
32 chr1:211843400-211846800 Weak transcription Fetal Stomach stomach
33 chr1:211843400-211847200 Weak transcription Thymus Thymus
34 chr1:211843400-211847800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:211843400-211848000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:211843400-211848000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:211843600-211847600 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr1:211843600-211847600 Weak transcription Fetal Lung lung
39 chr1:211844200-211848400 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:211844400-211848000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:211844400-211848000 Weak transcription Fetal Muscle Trunk muscle
42 chr1:211844400-211848000 Weak transcription NH-A brain
43 chr1:211844400-211848200 Weak transcription Fetal Intestine Large intestine
44 chr1:211844600-211846200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:211844600-211846800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:211844600-211846800 Weak transcription NHLF lung
47 chr1:211844600-211847800 Weak transcription Primary hematopoietic stem cells blood
48 chr1:211844600-211848000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:211844600-211848000 Weak transcription Fetal Muscle Leg muscle
50 chr1:211844800-211846800 Weak transcription Osteobl bone

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Last update: Aug 31, 2015