The 2.0 version of rSNPBase

Variant report

Variant rs17023159
Chromosome Location chr1:214713109-214713110
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
4 chr1:214701200-214719000 Weak transcription Hela-S3 cervix
5 chr1:214702800-214718800 Weak transcription Aorta Aorta
6 chr1:214706600-214713600 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:214706600-214713800 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:214706600-214714600 Weak transcription Lung lung
9 chr1:214706600-214715600 Weak transcription Esophagus oesophagus
10 chr1:214706600-214715600 Weak transcription Fetal Muscle Trunk muscle
11 chr1:214706600-214715600 Weak transcription Fetal Muscle Leg muscle
12 chr1:214706600-214715600 Weak transcription Left Ventricle heart
13 chr1:214706600-214715600 Weak transcription Ovary ovary
14 chr1:214706600-214720000 Weak transcription Fetal Intestine Small intestine
15 chr1:214706600-214720600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:214706800-214713200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:214706800-214713600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:214706800-214713600 Weak transcription NHLF lung
19 chr1:214706800-214713800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:214706800-214714600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:214706800-214715600 Weak transcription Gastric stomach
22 chr1:214706800-214715600 Weak transcription Pancreas Pancrea
23 chr1:214707000-214718200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:214710400-214716800 Enhancers Skeletal Muscle Male skeletal muscle
25 chr1:214710600-214713400 Enhancers Fetal Lung lung
26 chr1:214710600-214713600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:214710600-214714000 Enhancers Fetal Heart heart
28 chr1:214710600-214714200 Enhancers NHDF-Ad bronchial
29 chr1:214710800-214714200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:214710800-214714200 Enhancers Duodenum Smooth Muscle Duodenum
31 chr1:214710800-214718600 Weak transcription Right Atrium heart
32 chr1:214711000-214714000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:214711000-214715600 Weak transcription Spleen Spleen
34 chr1:214711400-214714800 Enhancers HSMM muscle
35 chr1:214711400-214714800 Enhancers Osteobl bone
36 chr1:214711600-214713600 Weak transcription NH-A brain
37 chr1:214711600-214714800 Enhancers NHEK skin
38 chr1:214711600-214716000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:214711800-214716600 Enhancers Colon Smooth Muscle Colon
40 chr1:214711800-214719400 Weak transcription A549 lung
41 chr1:214712000-214713400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr1:214712000-214713600 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr1:214712000-214713600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:214712000-214713600 Weak transcription Right Ventricle heart
45 chr1:214712000-214719800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:214712000-214721200 Weak transcription HSMMtube muscle
47 chr1:214712200-214713600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:214712200-214713600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:214712200-214713600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:214712200-214713600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015