Variant report

Variant rs17027858
Chromosome Location chr4:99535428-99535429
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99523000-99545000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr4:99527200-99541000 Weak transcription NHLF lung
3 chr4:99529200-99537800 Enhancers Brain Inferior Temporal Lobe brain
4 chr4:99529400-99536200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
5 chr4:99529400-99536400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr4:99529400-99536400 Enhancers Brain Angular Gyrus brain
7 chr4:99529400-99536600 Enhancers Fetal Brain Male brain
8 chr4:99529400-99539800 Enhancers Brain Hippocampus Middle brain
9 chr4:99529600-99535600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr4:99529600-99535800 Enhancers Brain Anterior Caudate brain
11 chr4:99529600-99542400 Enhancers Brain Cingulate Gyrus brain
12 chr4:99529600-99543200 Enhancers Cortex derived primary cultured neurospheres brain
13 chr4:99529800-99536400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr4:99529800-99538600 Weak transcription Lung lung
15 chr4:99530000-99540600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr4:99530400-99537400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:99530400-99538400 Weak transcription HUVEC blood vessel
18 chr4:99530600-99535600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr4:99530800-99537400 Enhancers Muscle Satellite Cultured Cells --
20 chr4:99531000-99538000 Enhancers NH-A brain
21 chr4:99531000-99538600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr4:99531000-99544200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr4:99531200-99536800 Enhancers Fetal Heart heart
24 chr4:99531200-99541400 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr4:99531400-99538800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr4:99531800-99536200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:99532000-99538600 Weak transcription Primary T cells fromperipheralblood blood
28 chr4:99532400-99538600 Weak transcription Gastric stomach
29 chr4:99532400-99538800 Weak transcription Right Ventricle heart
30 chr4:99532600-99545400 Weak transcription HMEC breast
31 chr4:99532800-99535600 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr4:99532800-99536000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:99533000-99535600 Enhancers HUES6 Cell Line embryonic stem cell
34 chr4:99533200-99536000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr4:99533400-99536200 Enhancers Rectal Smooth Muscle rectum
36 chr4:99533600-99535600 Enhancers Colon Smooth Muscle Colon
37 chr4:99533600-99538600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr4:99533800-99535600 Enhancers Primary T helper cells PMA-I stimulated --
39 chr4:99534000-99536400 Enhancers Fetal Brain Female brain
40 chr4:99534000-99537400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr4:99534000-99538600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr4:99534000-99538600 Weak transcription Esophagus oesophagus
43 chr4:99534000-99541400 Weak transcription H9 Cell Line embryonic stem cell
44 chr4:99534200-99536000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr4:99534200-99537000 Weak transcription Spleen Spleen
46 chr4:99534200-99538600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr4:99534200-99538600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr4:99534200-99538600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr4:99534200-99541400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr4:99534400-99535600 Enhancers Osteobl bone

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