Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10957382	0.97[ASN][1000 genomes]
rs13256466	0.97[ASN][1000 genomes]
rs1383274	0.97[ASN][1000 genomes]
rs1383276	0.97[ASN][1000 genomes]
rs1383279	0.97[ASN][1000 genomes]
rs1480388	0.97[ASN][1000 genomes]
rs1480389	0.97[ASN][1000 genomes]
rs1480390	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1585895	0.97[ASN][1000 genomes]
rs1703573	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1842403	0.97[ASN][1000 genomes]
rs1842404	0.90[ASN][1000 genomes]
rs2891746	0.90[ASN][1000 genomes]
rs4427188	0.97[ASN][1000 genomes]
rs6985247	0.93[ASN][1000 genomes]
rs7001422	0.97[ASN][1000 genomes]
rs7015074	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73678572	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7832761	0.97[ASN][1000 genomes]
rs9792367	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	esv1793350	chr8:50013702-50102628	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1034908	chr8:50023423-50416049	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv539601	chr8:50023423-50416049	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv1024410	chr8:50037085-50511501	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50066000-50069000	Weak transcription	GM12878-XiMat	blood

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