The 2.0 version of rSNPBase

Variant report

Variant rs17042418
Chromosome Location chr2:113570333-113570334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113566400-113572400 Enhancers Fetal Adrenal Gland Adrenal Gland
2 chr2:113567400-113575800 Weak transcription Brain Substantia Nigra brain
3 chr2:113568400-113572200 Enhancers HUVEC blood vessel
4 chr2:113568400-113573000 Enhancers HepG2 liver
5 chr2:113568600-113571600 Enhancers NHEK skin
6 chr2:113568600-113575000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:113568600-113575200 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr2:113568800-113570400 Enhancers Primary monocytes fromperipheralblood blood
9 chr2:113568800-113570400 Enhancers Hela-S3 cervix
10 chr2:113568800-113571000 Enhancers Spleen Spleen
11 chr2:113568800-113571000 Enhancers NHLF lung
12 chr2:113568800-113571800 Enhancers Adipose Nuclei Adipose
13 chr2:113568800-113572000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:113568800-113572200 Enhancers HMEC breast
15 chr2:113568800-113572400 Enhancers NH-A brain
16 chr2:113568800-113572400 Enhancers NHDF-Ad bronchial
17 chr2:113569000-113570400 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr2:113569000-113570400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:113569000-113570400 Enhancers Sigmoid Colon Sigmoid Colon
20 chr2:113569000-113570600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:113569000-113570600 Enhancers Left Ventricle heart
22 chr2:113569000-113570600 Enhancers Lung lung
23 chr2:113569000-113570800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:113569000-113570800 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr2:113569000-113570800 Enhancers Duodenum Smooth Muscle Duodenum
26 chr2:113569000-113570800 Enhancers Esophagus oesophagus
27 chr2:113569000-113571000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:113569000-113571400 Enhancers Skeletal Muscle Male skeletal muscle
29 chr2:113569000-113571800 Enhancers Fetal Stomach stomach
30 chr2:113569000-113572200 Enhancers Fetal Muscle Leg muscle
31 chr2:113569000-113572200 Enhancers Placenta Placenta
32 chr2:113569000-113572200 Enhancers Osteobl bone
33 chr2:113569000-113572400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:113569000-113572400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:113569000-113576000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:113569200-113570400 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr2:113569200-113570400 Enhancers Muscle Satellite Cultured Cells --
38 chr2:113569200-113570400 Enhancers Colon Smooth Muscle Colon
39 chr2:113569200-113570400 Enhancers A549 lung
40 chr2:113569200-113570600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr2:113569200-113570600 Enhancers Primary T cells fromperipheralblood blood
42 chr2:113569200-113570600 Enhancers Primary T helper cells PMA-I stimulated --
43 chr2:113569200-113570800 Enhancers Skeletal Muscle Female skeletal muscle
44 chr2:113569200-113570800 Enhancers Small Intestine intestine
45 chr2:113569200-113571000 Enhancers H9 Cell Line embryonic stem cell
46 chr2:113569200-113571400 Enhancers Stomach Smooth Muscle stomach
47 chr2:113569200-113572400 Enhancers HUES6 Cell Line embryonic stem cell
48 chr2:113569400-113570400 Enhancers Primary B cells from peripheral blood blood
49 chr2:113569400-113570400 Enhancers Liver Liver
50 chr2:113569400-113570400 Flanking Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015