The 2.0 version of rSNPBase

Variant report

Variant rs17042855
Chromosome Location chr3:16958832-16958833
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:16940800-16962200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr3:16941800-16959400 Enhancers Primary B cells from peripheral blood blood
3 chr3:16946200-16959000 Weak transcription Aorta Aorta
4 chr3:16949000-16965400 Enhancers Primary T helper cells PMA-I stimulated --
5 chr3:16949200-16961200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr3:16951800-16969200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr3:16952800-16964600 Weak transcription Ovary ovary
8 chr3:16953800-16960400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr3:16954800-16965400 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr3:16955000-16966000 Weak transcription Primary monocytes fromperipheralblood blood
11 chr3:16955600-16961600 Enhancers GM12878-XiMat blood
12 chr3:16956000-16961600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr3:16956200-16960200 Enhancers Primary hematopoietic stem cells blood
14 chr3:16956200-16961600 Enhancers Primary T helper cells fromperipheralblood blood
15 chr3:16956400-16960400 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr3:16956400-16962200 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr3:16956400-16963000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr3:16956400-16963600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr3:16956800-16961400 Enhancers Fetal Heart heart
20 chr3:16957000-16960000 Enhancers Liver Liver
21 chr3:16957200-16959400 Enhancers Right Atrium heart
22 chr3:16957200-16959600 Enhancers Small Intestine intestine
23 chr3:16957200-16960000 Enhancers Primary T cells from cord blood blood
24 chr3:16957200-16960200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr3:16957200-16962200 Enhancers Skeletal Muscle Male skeletal muscle
26 chr3:16957400-16959400 Enhancers Psoas Muscle Psoas
27 chr3:16957400-16960200 Enhancers Pancreatic Islets Pancreatic Islet
28 chr3:16957400-16964600 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr3:16957600-16959000 Weak transcription Brain Anterior Caudate brain
30 chr3:16957600-16959200 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr3:16957600-16959800 Enhancers Osteobl bone
32 chr3:16957600-16960000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr3:16957600-16964800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:16957800-16959200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr3:16957800-16959600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:16957800-16960400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
37 chr3:16958000-16959400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:16958000-16981800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr3:16958200-16959000 Enhancers HUES64 Cell Line embryonic stem cell
40 chr3:16958200-16960000 Enhancers Muscle Satellite Cultured Cells --
41 chr3:16958200-16960200 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr3:16958200-16960400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr3:16958200-16961600 Enhancers Primary B cells from cord blood blood
44 chr3:16958400-16959000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr3:16958400-16959000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr3:16958400-16959200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:16958400-16959200 Enhancers Spleen Spleen
48 chr3:16958400-16959200 Enhancers HSMM muscle
49 chr3:16958400-16959400 Enhancers Primary T cells fromperipheralblood blood
50 chr3:16958400-16959400 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015