Variant report

Variant rs17045958
Chromosome Location chr2:54781207-54781208
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54768200-54783800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr2:54770400-54782000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:54771600-54783400 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr2:54773400-54784000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:54773400-54784000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr2:54773800-54782200 Weak transcription Ovary ovary
7 chr2:54774000-54782400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:54774000-54782400 Weak transcription Osteobl bone
9 chr2:54774800-54781800 Weak transcription Liver Liver
10 chr2:54774800-54782400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr2:54775800-54782400 Weak transcription HSMM muscle
12 chr2:54777000-54782000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:54777200-54783600 Weak transcription Fetal Stomach stomach
14 chr2:54777600-54782000 Weak transcription Colon Smooth Muscle Colon
15 chr2:54777600-54782200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:54777600-54782800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:54777600-54783600 Weak transcription Brain Germinal Matrix brain
18 chr2:54777600-54784800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:54777600-54784800 Weak transcription Aorta Aorta
20 chr2:54777800-54782200 Weak transcription Gastric stomach
21 chr2:54777800-54782600 Weak transcription Fetal Kidney kidney
22 chr2:54777800-54784200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr2:54778000-54782400 Weak transcription NHLF lung
24 chr2:54778000-54783400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr2:54778000-54784200 Weak transcription Fetal Brain Male brain
26 chr2:54778200-54783000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:54778200-54783400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:54778600-54781800 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:54778600-54781800 Weak transcription Placenta Placenta
30 chr2:54778600-54782400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr2:54778600-54782600 Weak transcription Esophagus oesophagus
32 chr2:54778600-54784000 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr2:54778800-54781400 Weak transcription Psoas Muscle Psoas
34 chr2:54778800-54781800 Weak transcription Brain Hippocampus Middle brain
35 chr2:54778800-54782200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:54778800-54782200 Weak transcription HMEC breast
37 chr2:54778800-54782400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:54778800-54782400 Weak transcription Muscle Satellite Cultured Cells --
39 chr2:54778800-54782600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:54778800-54782600 Weak transcription NHEK skin
41 chr2:54778800-54782800 Weak transcription Stomach Mucosa stomach
42 chr2:54778800-54784000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr2:54778800-54784000 Weak transcription Primary B cells from cord blood blood
44 chr2:54779000-54781800 Weak transcription Colonic Mucosa Colon
45 chr2:54779000-54783600 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr2:54779000-54783600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr2:54779000-54784000 Weak transcription Primary B cells from peripheral blood blood
48 chr2:54779200-54783800 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:54779200-54784000 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr2:54779200-54784000 Weak transcription iPS-20b Cell Line embryonic stem cell

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