The 2.0 version of rSNPBase

Variant report

Variant rs17046581
Chromosome Location chr3:67598539-67598540
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:67560600-67620800 Weak transcription Esophagus oesophagus
2 chr3:67578200-67600400 Weak transcription Lung lung
3 chr3:67578200-67612400 Weak transcription Spleen Spleen
4 chr3:67578200-67634600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:67578600-67601800 Weak transcription Left Ventricle heart
6 chr3:67579200-67603400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr3:67579200-67608800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:67579200-67620600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr3:67579400-67600600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr3:67579400-67623000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr3:67579400-67633800 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr3:67579400-67657600 Weak transcription Pancreas Pancrea
13 chr3:67579600-67601000 Weak transcription Duodenum Mucosa Duodenum
14 chr3:67579600-67601800 Weak transcription Fetal Intestine Large intestine
15 chr3:67579600-67601800 Weak transcription Ovary ovary
16 chr3:67580000-67606400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:67580800-67620200 Weak transcription GM12878-XiMat blood
18 chr3:67582000-67601600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr3:67582200-67637000 Weak transcription Rectal Smooth Muscle rectum
20 chr3:67582400-67609000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr3:67582400-67620400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:67582600-67612000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:67584400-67601600 Weak transcription A549 lung
24 chr3:67587000-67620200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr3:67587400-67628000 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr3:67588800-67602200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr3:67589000-67603000 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr3:67589800-67615000 Weak transcription HSMMtube muscle
29 chr3:67591400-67600400 Weak transcription Psoas Muscle Psoas
30 chr3:67591400-67620200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr3:67591600-67606200 Weak transcription Liver Liver
32 chr3:67591600-67611200 Weak transcription HepG2 liver
33 chr3:67592600-67600800 Weak transcription Fetal Stomach stomach
34 chr3:67593000-67604600 Weak transcription Primary B cells from peripheral blood blood
35 chr3:67594000-67600800 Weak transcription Fetal Intestine Small intestine
36 chr3:67594000-67612400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr3:67594000-67620600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr3:67594000-67631000 Weak transcription K562 blood
39 chr3:67594200-67600800 Weak transcription Primary T cells fromperipheralblood blood
40 chr3:67594400-67610400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr3:67594800-67601600 Weak transcription Fetal Lung lung
42 chr3:67594800-67605200 Weak transcription Muscle Satellite Cultured Cells --
43 chr3:67594800-67606200 Weak transcription Osteobl bone
44 chr3:67595000-67639400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr3:67596000-67601800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr3:67596200-67601800 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr3:67596200-67603400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr3:67596200-67608200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr3:67596200-67608800 Weak transcription Small Intestine intestine
50 chr3:67596400-67629000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015