Variant report

Variant	rs17046625
Chromosome Location	chr4:166452025-166452026
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs17046582	1.00[AMR][1000 genomes]
rs17046632	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58493479	1.00[AMR][1000 genomes]
rs58897658	1.00[AMR][1000 genomes]
rs59397196	1.00[AMR][1000 genomes]
rs61073284	1.00[AMR][1000 genomes]
rs61552650	1.00[AMR][1000 genomes]
rs72976184	1.00[AMR][1000 genomes]
rs72976187	1.00[AMR][1000 genomes]
rs7660700	1.00[AMR][1000 genomes]
rs9683908	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508327	chr4:166424440-166475679	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166438800-166462000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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