Variant report

Variant rs17055589
Chromosome Location chr3:55674234-55674235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:55670800-55674800 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr3:55670800-55675400 Enhancers HMEC breast
3 chr3:55671000-55674600 Enhancers Placenta Placenta
4 chr3:55671800-55675200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr3:55672800-55674400 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr3:55672800-55674400 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr3:55672800-55674600 Enhancers HUES64 Cell Line embryonic stem cell
8 chr3:55672800-55674800 Enhancers H9 Cell Line embryonic stem cell
9 chr3:55673000-55674600 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr3:55673000-55674800 Enhancers HUES6 Cell Line embryonic stem cell
11 chr3:55673200-55674600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
12 chr3:55673200-55674600 Flanking Active TSS Primary T cells from cord blood blood
13 chr3:55673200-55674800 Enhancers Primary monocytes fromperipheralblood blood
14 chr3:55673400-55674400 Enhancers Fetal Thymus thymus
15 chr3:55673400-55674600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr3:55673400-55674600 Enhancers Monocytes-CD14+_RO01746 blood
17 chr3:55673800-55674400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr3:55673800-55674600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:55674000-55674400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:55674000-55674600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr3:55674000-55674600 Enhancers Stomach Mucosa stomach
22 chr3:55674000-55674600 Flanking Active TSS GM12878-XiMat blood
23 chr3:55674000-55674600 Flanking Active TSS NHEK skin
24 chr3:55674200-55674600 Enhancers Rectal Mucosa Donor 31 rectum
25 chr3:55674200-55679400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:55674200-55679600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr3:55674200-55681000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr3:55674200-55681200 Weak transcription ES-WA7 Cell Line embryonic stem cell

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