Variant report

Variant	rs17069066
Chromosome Location	chr6:139946078-139946079
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2185921	1.00[ASN][1000 genomes]
rs59386518	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869066	chr6:139777114-140639695	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139943400-139946200	Enhancers	K562	blood
2	chr6:139944600-139946200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr6:139944800-139949600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:139945200-139946400	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr6:139945200-139946800	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr6:139945400-139947400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr6:139945800-139946200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:139946000-139948200	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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