Variant report
| Variant | rs17070123 |
|---|---|
| Chromosome Location | chr5:167827021-167827022 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:167809400-167835600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 2 | chr5:167809600-167828200 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr5:167811400-167831000 | Weak transcription | Brain Germinal Matrix | brain |
| 4 | chr5:167812200-167835600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr5:167812400-167836800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr5:167812600-167830400 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr5:167812600-167896400 | Weak transcription | Colonic Mucosa | Colon |
| 8 | chr5:167812800-167828000 | Weak transcription | Fetal Lung | lung |
| 9 | chr5:167814400-167830400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr5:167818000-167830600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr5:167820400-167828800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 12 | chr5:167820800-167830600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr5:167821200-167830400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 14 | chr5:167822600-167830600 | Weak transcription | NH-A | brain |
| 15 | chr5:167823600-167830800 | Weak transcription | NHLF | lung |
| 16 | chr5:167824200-167828200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr5:167824200-167836600 | Weak transcription | Right Atrium | heart |
| 18 | chr5:167824400-167827200 | Strong transcription | Placenta | Placenta |
| 19 | chr5:167824400-167827600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 20 | chr5:167824400-167839400 | Strong transcription | Fetal Intestine Small | intestine |
| 21 | chr5:167824400-167849200 | Strong transcription | Liver | Liver |
| 22 | chr5:167824600-167828000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 23 | chr5:167824600-167828200 | Strong transcription | NHEK | skin |
| 24 | chr5:167824600-167829400 | Strong transcription | Fetal Intestine Large | intestine |
| 25 | chr5:167824600-167830800 | Weak transcription | Fetal Brain Male | brain |
| 26 | chr5:167824600-167835400 | Strong transcription | A549 | lung |
| 27 | chr5:167824800-167827200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr5:167824800-167827200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 29 | chr5:167824800-167827600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 30 | chr5:167824800-167827800 | Strong transcription | Hela-S3 | cervix |
| 31 | chr5:167825000-167835600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 32 | chr5:167825000-167857000 | Weak transcription | Fetal Kidney | kidney |
| 33 | chr5:167825400-167827200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 34 | chr5:167826000-167827600 | Strong transcription | Brain Anterior Caudate | brain |
| 35 | chr5:167826400-167827200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 36 | chr5:167826400-167835200 | Weak transcription | Lung | lung |
| 37 | chr5:167826400-167835200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 38 | chr5:167826400-167835400 | Weak transcription | HepG2 | liver |
| 39 | chr5:167826400-167838400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 40 | chr5:167826600-167827200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 41 | chr5:167826600-167830400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 42 | chr5:167826600-167830600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr5:167826600-167831000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 44 | chr5:167826800-167828200 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr5:167826800-167828200 | Weak transcription | HMEC | breast |
| 46 | chr5:167826800-167828400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 47 | chr5:167826800-167829000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 48 | chr5:167826800-167829200 | Weak transcription | Esophagus | oesophagus |
| 49 | chr5:167826800-167830400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 50 | chr5:167826800-167830600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
