The 2.0 version of rSNPBase

Variant report

Variant rs17077743
Chromosome Location chr8:6499757-6499758
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:6474200-6505200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr8:6476400-6502800 Weak transcription Colonic Mucosa Colon
3 chr8:6479600-6499800 Weak transcription Aorta Aorta
4 chr8:6480000-6502000 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr8:6480200-6501800 Weak transcription NHEK skin
6 chr8:6480200-6502000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr8:6480200-6502600 Weak transcription Gastric stomach
8 chr8:6480200-6523800 Weak transcription Fetal Brain Female brain
9 chr8:6480400-6499800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr8:6480400-6499800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr8:6480400-6499800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr8:6480400-6502200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr8:6480400-6505400 Weak transcription Lung lung
14 chr8:6481800-6501800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr8:6482000-6501800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr8:6482000-6503600 Weak transcription Esophagus oesophagus
17 chr8:6482200-6501200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr8:6483800-6504400 Weak transcription Liver Liver
19 chr8:6484000-6500200 Weak transcription Primary T cells fromperipheralblood blood
20 chr8:6484000-6502000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr8:6484000-6502200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr8:6484400-6499800 Weak transcription Brain Hippocampus Middle brain
23 chr8:6484400-6502400 Weak transcription Stomach Smooth Muscle stomach
24 chr8:6484400-6503000 Weak transcription Spleen Spleen
25 chr8:6484400-6503400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr8:6484800-6505200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr8:6485000-6499800 Weak transcription Fetal Muscle Leg muscle
28 chr8:6485000-6500400 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr8:6485000-6502800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr8:6485000-6504400 Weak transcription Fetal Intestine Large intestine
31 chr8:6485200-6502000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr8:6485400-6499800 Weak transcription Fetal Muscle Trunk muscle
33 chr8:6485400-6501400 Weak transcription Fetal Intestine Small intestine
34 chr8:6485400-6503800 Weak transcription Fetal Stomach stomach
35 chr8:6487400-6502000 Weak transcription Primary B cells from cord blood blood
36 chr8:6487400-6502000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr8:6487600-6501000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr8:6487800-6502000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr8:6488800-6502000 Weak transcription GM12878-XiMat blood
40 chr8:6489800-6500400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr8:6491400-6500200 Weak transcription Primary B cells from peripheral blood blood
42 chr8:6492400-6500200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr8:6493400-6500200 Weak transcription Primary T cells from cord blood blood
44 chr8:6495000-6502200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr8:6495800-6500200 Weak transcription Thymus Thymus
46 chr8:6496600-6499800 Weak transcription Left Ventricle heart
47 chr8:6496600-6502600 Weak transcription Pancreas Pancrea
48 chr8:6496600-6503800 Weak transcription Ovary ovary
49 chr8:6498200-6501400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr8:6498200-6502000 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015