The 2.0 version of rSNPBase

Variant report

Variant rs17082264
Chromosome Location chr4:53873636-53873637
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53863400-53877800 Weak transcription Gastric stomach
2 chr4:53863400-53878000 Weak transcription NH-A brain
3 chr4:53863400-53878200 Weak transcription Fetal Intestine Small intestine
4 chr4:53863800-53876600 Weak transcription Muscle Satellite Cultured Cells --
5 chr4:53864000-53877800 Weak transcription NHDF-Ad bronchial
6 chr4:53864200-53875800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr4:53864400-53877000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr4:53864400-53877600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr4:53864600-53876000 Weak transcription Fetal Muscle Leg muscle
10 chr4:53864600-53876600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:53865000-53873800 Weak transcription Primary T cells from cord blood blood
12 chr4:53865000-53876000 Weak transcription Right Atrium heart
13 chr4:53865600-53876800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr4:53869800-53874800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr4:53870600-53878200 Weak transcription HSMM muscle
16 chr4:53870800-53877600 Weak transcription Osteobl bone
17 chr4:53870800-53877800 Weak transcription HSMMtube muscle
18 chr4:53870800-53880200 Weak transcription Esophagus oesophagus
19 chr4:53871000-53876400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr4:53871800-53876200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr4:53872000-53874600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr4:53872200-53874000 Weak transcription Primary hematopoietic stem cells blood
23 chr4:53872400-53876000 Weak transcription Liver Liver
24 chr4:53873000-53873800 Weak transcription Spleen Spleen
25 chr4:53873000-53874000 Weak transcription Fetal Kidney kidney
26 chr4:53873000-53874000 Weak transcription Fetal Lung lung
27 chr4:53873000-53875000 Weak transcription HepG2 liver
28 chr4:53873000-53876000 Weak transcription Right Ventricle heart
29 chr4:53873000-53876400 Weak transcription Fetal Heart heart
30 chr4:53873200-53874000 Weak transcription Ovary ovary
31 chr4:53873200-53877800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr4:53873200-53877800 Weak transcription Psoas Muscle Psoas
33 chr4:53873200-53877800 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr4:53873200-53880200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr4:53873400-53874000 Weak transcription Fetal Muscle Trunk muscle
36 chr4:53873400-53875800 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr4:53873400-53875800 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr4:53873400-53876000 Weak transcription Pancreas Pancrea
39 chr4:53873400-53876600 Weak transcription Lung lung
40 chr4:53873400-53886800 Weak transcription Left Ventricle heart
41 chr4:53873600-53874000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
42 chr4:53873600-53876000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015