The 2.0 version of rSNPBase

Variant report

Variant rs17084917
Chromosome Location chr5:94927843-94927844
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:94892200-94934400 Weak transcription Fetal Stomach stomach
2 chr5:94892200-94936600 Weak transcription Fetal Lung lung
3 chr5:94892400-94937200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:94900400-94942400 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr5:94902000-94936600 Weak transcription HSMMtube muscle
6 chr5:94904600-94936600 Weak transcription Adipose Nuclei Adipose
7 chr5:94904600-94939400 Weak transcription Primary B cells from peripheral blood blood
8 chr5:94904800-94931600 Weak transcription Liver Liver
9 chr5:94905000-94936600 Weak transcription Fetal Intestine Large intestine
10 chr5:94905000-94936600 Weak transcription Ovary ovary
11 chr5:94905000-94936800 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr5:94905000-94936800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr5:94905000-94939200 Weak transcription Aorta Aorta
14 chr5:94905000-94940600 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr5:94906400-94936800 Weak transcription Primary T cells fromperipheralblood blood
16 chr5:94909800-94935800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr5:94912800-94943400 Weak transcription Fetal Intestine Small intestine
18 chr5:94915000-94939000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr5:94917400-94940800 Weak transcription Fetal Brain Male brain
20 chr5:94920000-94931600 Weak transcription Fetal Heart heart
21 chr5:94920600-94935800 Weak transcription Primary B cells from cord blood blood
22 chr5:94925600-94936600 Weak transcription Fetal Muscle Leg muscle
23 chr5:94925800-94928400 Enhancers Muscle Satellite Cultured Cells --
24 chr5:94925800-94929000 Enhancers NHDF-Ad bronchial
25 chr5:94925800-94929200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr5:94926000-94929000 Enhancers NHLF lung
27 chr5:94926000-94936600 Weak transcription Fetal Muscle Trunk muscle
28 chr5:94926200-94928600 Enhancers HMEC breast
29 chr5:94926200-94937400 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr5:94926400-94928200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr5:94926400-94928200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:94926400-94928400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr5:94926400-94928600 Enhancers HUVEC blood vessel
34 chr5:94926400-94941800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr5:94926600-94928000 Enhancers NH-A brain
36 chr5:94926600-94928400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr5:94926600-94936200 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr5:94926800-94928200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:94926800-94928200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr5:94926800-94928200 Enhancers NHEK skin
41 chr5:94926800-94938600 Weak transcription K562 blood
42 chr5:94926800-94942000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr5:94927000-94928600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr5:94927000-94936600 Weak transcription Primary hematopoietic stem cells blood
45 chr5:94927000-94936600 Weak transcription Fetal Thymus thymus
46 chr5:94927000-94936800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr5:94927000-94940800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:94927000-94948800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr5:94927000-94954200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr5:94927000-94954200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015