The 2.0 version of rSNPBase

Variant report

Variant rs17085885
Chromosome Location chr4:56401897-56401898
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56361600-56411800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr4:56372600-56405200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr4:56385000-56403400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:56391600-56403400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr4:56391600-56405600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr4:56391600-56405600 Weak transcription Osteobl bone
7 chr4:56391600-56405800 Weak transcription Muscle Satellite Cultured Cells --
8 chr4:56391600-56408800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr4:56391600-56409400 Weak transcription NHDF-Ad bronchial
10 chr4:56391800-56409400 Weak transcription HMEC breast
11 chr4:56391800-56409400 Weak transcription NHEK skin
12 chr4:56391800-56409600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr4:56393200-56408000 Weak transcription K562 blood
14 chr4:56394800-56403400 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr4:56396200-56406600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr4:56396800-56411600 Weak transcription Psoas Muscle Psoas
17 chr4:56397000-56403400 Weak transcription Primary T cells fromperipheralblood blood
18 chr4:56397000-56404000 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr4:56397200-56404000 Weak transcription Dnd41 blood
20 chr4:56399200-56404200 Weak transcription Primary T cells from cord blood blood
21 chr4:56399600-56404200 Weak transcription Fetal Lung lung
22 chr4:56399600-56411600 Weak transcription Left Ventricle heart
23 chr4:56399800-56411000 Weak transcription Brain Substantia Nigra brain
24 chr4:56400000-56410200 Weak transcription Fetal Intestine Small intestine
25 chr4:56400800-56402200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr4:56400800-56405000 Weak transcription Fetal Thymus thymus
27 chr4:56400800-56406800 Weak transcription H1 Cell Line embryonic stem cell
28 chr4:56400800-56409600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr4:56401000-56403200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr4:56401000-56404200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr4:56401000-56404400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr4:56401000-56409400 Weak transcription HSMM muscle
33 chr4:56401000-56409600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr4:56401000-56411400 Weak transcription Primary B cells from peripheral blood blood
35 chr4:56401200-56402400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr4:56401200-56410000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr4:56401200-56411800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr4:56401600-56402800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr4:56401600-56404800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr4:56401600-56410200 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015