Variant report

Variant	rs17091351
Chromosome Location	chr14:72116890-72116891
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71785913..71788316-chr14:72114370..72116896,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000197555	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17095029	0.85[EUR][1000 genomes]
rs17098340	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498021	chr14:71874708-72128721	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3398985	chr14:71927884-72404676	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72073200-72137800	Weak transcription	Esophagus	oesophagus
2	chr14:72082600-72125000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr14:72083600-72118000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr14:72083600-72128200	Weak transcription	Spleen	Spleen
5	chr14:72088200-72159600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr14:72090000-72124200	Weak transcription	Hela-S3	cervix
7	chr14:72091000-72117000	Weak transcription	Liver	Liver
8	chr14:72091000-72127400	Weak transcription	Pancreas	Pancrea
9	chr14:72091600-72117000	Weak transcription	Stomach Smooth Muscle	stomach
10	chr14:72091600-72117200	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr14:72099400-72117200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr14:72099400-72118400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr14:72100000-72117000	Weak transcription	Dnd41	blood
14	chr14:72100000-72118400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr14:72101600-72117000	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr14:72106000-72117000	Weak transcription	Primary T cells from cord blood	blood
17	chr14:72106000-72117000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr14:72106000-72125000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr14:72109200-72117000	Weak transcription	Aorta	Aorta
20	chr14:72109200-72117000	Weak transcription	Duodenum Mucosa	Duodenum
21	chr14:72109200-72117000	Weak transcription	HSMM	muscle
22	chr14:72109200-72117800	Weak transcription	Fetal Lung	lung
23	chr14:72109200-72137800	Weak transcription	Fetal Stomach	stomach
24	chr14:72109800-72150800	Weak transcription	Colonic Mucosa	Colon
25	chr14:72110000-72117000	Weak transcription	GM12878-XiMat	blood
26	chr14:72110000-72117200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr14:72110000-72118200	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr14:72110600-72117200	Weak transcription	Brain Cingulate Gyrus	brain
29	chr14:72111200-72117000	Weak transcription	Adipose Nuclei	Adipose
30	chr14:72111200-72139000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr14:72111400-72117600	Weak transcription	Primary hematopoietic stem cells	blood
32	chr14:72111400-72117800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr14:72112000-72117200	Weak transcription	Thymus	Thymus
34	chr14:72112000-72118000	Weak transcription	Small Intestine	intestine
35	chr14:72112000-72128000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr14:72112400-72117000	Weak transcription	Brain Angular Gyrus	brain
37	chr14:72113400-72117000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr14:72113600-72118400	Weak transcription	HSMMtube	muscle
39	chr14:72113800-72117200	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr14:72113800-72141600	Weak transcription	Placenta Amnion	Placenta Amnion
41	chr14:72114000-72117000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr14:72114000-72117000	Weak transcription	Fetal Kidney	kidney
43	chr14:72114000-72117200	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr14:72114000-72117400	Enhancers	iPS-18 Cell Line	embryonic stem cell
45	chr14:72114200-72117000	Weak transcription	NHEK	skin
46	chr14:72114400-72117000	Weak transcription	Primary neutrophils fromperipheralblood	blood
47	chr14:72114400-72117000	Weak transcription	Primary B cells from peripheral blood	blood
48	chr14:72114400-72117000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr14:72114400-72118400	Weak transcription	Fetal Intestine Large	intestine
50	chr14:72114400-72118400	Weak transcription	Sigmoid Colon	Sigmoid Colon

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