Variant report

Variant	rs17091615
Chromosome Location	chr14:32599329-32599330
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32597351..32599387-chr14:32602127..32605349,3	MCF-7	breast:
2	chr14:32598573..32600390-chr14:32602464..32604146,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10143686	1.00[AMR][1000 genomes]
rs11847643	1.00[AMR][1000 genomes]
rs1952484	1.00[AMR][1000 genomes]
rs1958369	1.00[AMR][1000 genomes]
rs2383283	1.00[AMR][1000 genomes]
rs7141680	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32571800-32606800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr14:32571800-32614400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr14:32574400-32599400	Weak transcription	Aorta	Aorta
4	chr14:32574400-32615600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr14:32577200-32605400	Weak transcription	Primary T cells from cord blood	blood
6	chr14:32577400-32625000	Weak transcription	Small Intestine	intestine
7	chr14:32577800-32603200	Weak transcription	Brain Hippocampus Middle	brain
8	chr14:32577800-32603800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr14:32578000-32600000	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr14:32587600-32603600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr14:32590000-32623000	Weak transcription	HSMMtube	muscle
12	chr14:32591600-32603200	Weak transcription	Hela-S3	cervix
13	chr14:32591600-32621200	Weak transcription	NHLF	lung
14	chr14:32592200-32601600	Weak transcription	HUVEC	blood vessel
15	chr14:32592200-32606400	Weak transcription	Brain Substantia Nigra	brain
16	chr14:32592800-32614400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr14:32593000-32601800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr14:32593600-32606400	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr14:32593800-32607200	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr14:32594000-32599400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr14:32595800-32605600	Weak transcription	Primary B cells from cord blood	blood
22	chr14:32595800-32605600	Weak transcription	Fetal Lung	lung
23	chr14:32595800-32605800	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr14:32596000-32603400	Weak transcription	Fetal Kidney	kidney
25	chr14:32596000-32605600	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr14:32596000-32606600	Weak transcription	Brain Angular Gyrus	brain
27	chr14:32596000-32622800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
28	chr14:32596200-32605400	Weak transcription	Primary T helper cells fromperipheralblood	blood
29	chr14:32596200-32605800	Weak transcription	Fetal Muscle Trunk	muscle
30	chr14:32596400-32620400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
31	chr14:32596600-32616200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr14:32597000-32600200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr14:32597000-32600400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
34	chr14:32597200-32600400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
35	chr14:32597400-32600800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr14:32597400-32601800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr14:32597600-32600200	Strong transcription	Duodenum Mucosa	Duodenum
38	chr14:32597600-32600800	ZNF genes & repeats	Dnd41	blood
39	chr14:32597600-32601000	Weak transcription	Thymus	Thymus
40	chr14:32597600-32603000	Weak transcription	Colonic Mucosa	Colon
41	chr14:32597600-32606400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr14:32597800-32600200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr14:32597800-32603200	Weak transcription	Spleen	Spleen
44	chr14:32597800-32605200	Weak transcription	Primary hematopoietic stem cells	blood
45	chr14:32597800-32607200	Weak transcription	Ovary	ovary
46	chr14:32597800-32607400	Weak transcription	Lung	lung
47	chr14:32597800-32616600	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr14:32597800-32619600	Weak transcription	Esophagus	oesophagus
49	chr14:32598000-32599600	Enhancers	Muscle Satellite Cultured Cells	--
50	chr14:32598000-32599800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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