Variant report

Variant	rs17092192
Chromosome Location	chr8:20121441-20121442
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:20121168..20122676-chr8:20125899..20127872,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs62499970	1.00[EUR][1000 genomes]
rs7015008	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033511	chr8:19751299-20625091	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv530877	chr8:19873053-20593254	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20108400-20125200	Weak transcription	Fetal Intestine Small	intestine
2	chr8:20111400-20122000	Weak transcription	Gastric	stomach
3	chr8:20113200-20122200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr8:20117200-20126000	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr8:20117600-20125200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
6	chr8:20117800-20122000	Enhancers	Fetal Stomach	stomach
7	chr8:20118000-20122400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr8:20118400-20122200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr8:20118400-20124200	Enhancers	Fetal Muscle Leg	muscle
10	chr8:20118400-20126200	Enhancers	Fetal Lung	lung
11	chr8:20118400-20126200	Enhancers	Fetal Thymus	thymus
12	chr8:20118600-20124000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:20118800-20122200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:20118800-20122400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr8:20118800-20123400	Enhancers	NH-A	brain
16	chr8:20119000-20121600	Enhancers	Fetal Kidney	kidney
17	chr8:20119000-20122200	Enhancers	HSMM	muscle
18	chr8:20119000-20126200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr8:20119600-20121600	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr8:20119600-20122000	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr8:20119600-20122000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr8:20119600-20127000	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr8:20119800-20122000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr8:20119800-20122200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr8:20119800-20122400	Weak transcription	Right Atrium	heart
26	chr8:20119800-20124600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr8:20119800-20125200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr8:20120000-20123200	Enhancers	Primary T cells from cord blood	blood
29	chr8:20120000-20124200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
30	chr8:20120000-20124600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr8:20120000-20124800	Weak transcription	Brain Anterior Caudate	brain
32	chr8:20120000-20124800	Weak transcription	Brain Germinal Matrix	brain
33	chr8:20120200-20122400	Weak transcription	Fetal Brain Male	brain
34	chr8:20120200-20122400	Weak transcription	Thymus	Thymus
35	chr8:20120200-20124400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr8:20120200-20125000	Weak transcription	Fetal Heart	heart
37	chr8:20120200-20125200	Weak transcription	Brain Angular Gyrus	brain
38	chr8:20120400-20123000	Enhancers	H1 Cell Line	embryonic stem cell
39	chr8:20120400-20124200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
40	chr8:20120400-20124200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr8:20120400-20126000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
42	chr8:20120600-20122800	Enhancers	Left Ventricle	heart
43	chr8:20120600-20124200	Enhancers	Primary T helper cells fromperipheralblood	blood
44	chr8:20120600-20124200	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr8:20120600-20126000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr8:20120600-20126000	Weak transcription	Brain Substantia Nigra	brain
47	chr8:20120600-20132800	Enhancers	Primary T cells fromperipheralblood	blood
48	chr8:20120800-20121600	Active TSS	Osteobl	bone
49	chr8:20120800-20121800	Weak transcription	NHDF-Ad	bronchial
50	chr8:20120800-20122400	Enhancers	HUES64 Cell Line	embryonic stem cell

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