The 2.0 version of rSNPBase

Variant report

Variant rs17092232
Chromosome Location chr10:116415278-116415279
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116394400-116422600 Weak transcription Fetal Intestine Small intestine
2 chr10:116406200-116422000 Weak transcription Fetal Lung lung
3 chr10:116408400-116415600 Enhancers HUVEC blood vessel
4 chr10:116408600-116422000 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr10:116408600-116441400 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr10:116408800-116427400 Weak transcription Primary hematopoietic stem cells blood
7 chr10:116409600-116421200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr10:116409600-116423600 Weak transcription Esophagus oesophagus
9 chr10:116410800-116422000 Weak transcription Brain Hippocampus Middle brain
10 chr10:116411000-116415800 Enhancers Right Ventricle heart
11 chr10:116411000-116417400 Enhancers Right Atrium heart
12 chr10:116411400-116415800 Enhancers Skeletal Muscle Male skeletal muscle
13 chr10:116411400-116418800 Enhancers Fetal Heart heart
14 chr10:116412200-116415600 Enhancers Rectal Mucosa Donor 31 rectum
15 chr10:116412200-116415800 Enhancers Lung lung
16 chr10:116412600-116423800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr10:116412800-116415800 Enhancers Left Ventricle heart
18 chr10:116413400-116415600 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr10:116413400-116418000 Weak transcription Psoas Muscle Psoas
20 chr10:116413800-116422600 Weak transcription Fetal Intestine Large intestine
21 chr10:116414000-116422200 Weak transcription Brain Anterior Caudate brain
22 chr10:116414200-116415600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr10:116414200-116415600 Enhancers NHEK skin
24 chr10:116414200-116415800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr10:116414400-116415600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr10:116414400-116415600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr10:116414400-116415600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr10:116414400-116415600 Enhancers A549 lung
29 chr10:116414400-116415600 Enhancers Hela-S3 cervix
30 chr10:116414400-116415800 Enhancers Placenta Placenta
31 chr10:116414600-116415400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr10:116414600-116415400 Weak transcription Pancreas Pancrea
33 chr10:116414600-116415600 Enhancers Placenta Amnion Placenta Amnion
34 chr10:116414800-116415400 Enhancers HSMMtube muscle
35 chr10:116414800-116416800 Weak transcription Small Intestine intestine
36 chr10:116415000-116415400 Enhancers HMEC breast
37 chr10:116415000-116415400 Enhancers NH-A brain
38 chr10:116415000-116422400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr10:116415200-116420400 Weak transcription HepG2 liver
40 chr10:116415200-116422000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr10:116415200-116422200 Weak transcription HUES6 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015