The 2.0 version of rSNPBase

Variant report

Variant rs17095398
Chromosome Location chr10:118645834-118645835
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118636600-118647800 Weak transcription Liver Liver
2 chr10:118637200-118648400 Weak transcription Brain Substantia Nigra brain
3 chr10:118637200-118658800 Weak transcription Pancreas Pancrea
4 chr10:118637600-118670400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr10:118637800-118648400 Weak transcription Brain Angular Gyrus brain
6 chr10:118638600-118648400 Weak transcription Fetal Intestine Large intestine
7 chr10:118639000-118666600 Weak transcription Fetal Intestine Small intestine
8 chr10:118639400-118646400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr10:118639600-118648000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr10:118640400-118646400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr10:118640400-118647800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr10:118640400-118649600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr10:118640600-118646000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr10:118640600-118647800 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr10:118640800-118646000 Weak transcription Brain Cingulate Gyrus brain
16 chr10:118640800-118646400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr10:118640800-118647600 Weak transcription Muscle Satellite Cultured Cells --
18 chr10:118640800-118647600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr10:118640800-118651600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr10:118641000-118647200 Weak transcription HSMM muscle
21 chr10:118641000-118647600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr10:118641000-118650600 Weak transcription Adipose Nuclei Adipose
23 chr10:118641400-118648000 Weak transcription Lung lung
24 chr10:118641800-118647600 Weak transcription NH-A brain
25 chr10:118641800-118648000 Weak transcription Esophagus oesophagus
26 chr10:118641800-118648000 Weak transcription Stomach Mucosa stomach
27 chr10:118641800-118658800 Weak transcription K562 blood
28 chr10:118641800-118665200 Weak transcription HepG2 liver
29 chr10:118641800-118665400 Weak transcription Fetal Brain Female brain
30 chr10:118642200-118647000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:118642200-118649200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr10:118642400-118647800 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr10:118642600-118652800 Weak transcription Fetal Brain Male brain
34 chr10:118642600-118670400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr10:118642800-118646000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr10:118643000-118647200 Strong transcription A549 lung
37 chr10:118643000-118650200 Strong transcription Primary monocytes fromperipheralblood blood
38 chr10:118643400-118650800 Weak transcription Aorta Aorta
39 chr10:118643600-118649800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr10:118643800-118651000 Weak transcription Brain Anterior Caudate brain
41 chr10:118644000-118647800 Weak transcription HUVEC blood vessel
42 chr10:118645000-118646000 Strong transcription Brain Hippocampus Middle brain
43 chr10:118645200-118646200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr10:118645200-118646800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr10:118645200-118648600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr10:118645400-118649000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr10:118645400-118673200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr10:118645600-118648600 Weak transcription Brain Inferior Temporal Lobe brain
49 chr10:118645800-118646200 Strong transcription Hela-S3 cervix
50 chr10:118645800-118646400 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015