Variant report

Variant	rs17098527
Chromosome Location	chr14:32637503-32637504
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10483395	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10483396	0.87[CHB][hapmap];0.86[ASN][1000 genomes]
rs7151266	0.85[ASN][1000 genomes]
rs72664675	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs72664677	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72664682	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs8013272	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32624200-32638400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr14:32626600-32638200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr14:32636800-32637800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr14:32637000-32637600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:32637000-32637800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr14:32637400-32637600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:32637400-32637800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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