The 2.0 version of rSNPBase

Variant report

Variant rs17104020
Chromosome Location chr14:67598300-67598301
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:67554600-67604200 Weak transcription HMEC breast
2 chr14:67568000-67618400 Weak transcription Gastric stomach
3 chr14:67573000-67615200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr14:67573200-67619800 Weak transcription HepG2 liver
5 chr14:67573400-67615000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr14:67574600-67600600 Weak transcription GM12878-XiMat blood
7 chr14:67580000-67622800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr14:67584200-67637400 Weak transcription Pancreas Pancrea
9 chr14:67586600-67607800 Weak transcription Fetal Intestine Small intestine
10 chr14:67588000-67639400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr14:67588400-67599400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr14:67588400-67599400 Weak transcription NHEK skin
13 chr14:67588400-67639200 Weak transcription Primary hematopoietic stem cells blood
14 chr14:67588600-67638400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr14:67590200-67599600 Weak transcription HSMM muscle
16 chr14:67590200-67600400 Weak transcription Brain Hippocampus Middle brain
17 chr14:67590200-67600600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr14:67590200-67610000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr14:67590200-67610800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr14:67590200-67613800 Weak transcription Psoas Muscle Psoas
21 chr14:67590200-67617800 Weak transcription Brain Angular Gyrus brain
22 chr14:67590200-67618000 Weak transcription Brain Cingulate Gyrus brain
23 chr14:67590200-67637400 Weak transcription Aorta Aorta
24 chr14:67590200-67638000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr14:67590400-67598600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr14:67590400-67610000 Weak transcription Duodenum Mucosa Duodenum
27 chr14:67590400-67614200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr14:67590400-67618000 Weak transcription Brain Substantia Nigra brain
29 chr14:67590800-67601200 Weak transcription Fetal Brain Male brain
30 chr14:67590800-67616400 Weak transcription Dnd41 blood
31 chr14:67590800-67621400 Weak transcription Right Ventricle heart
32 chr14:67590800-67637600 Weak transcription Stomach Smooth Muscle stomach
33 chr14:67591200-67601800 Weak transcription Brain Anterior Caudate brain
34 chr14:67591200-67618400 Weak transcription Fetal Stomach stomach
35 chr14:67591400-67612200 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr14:67591400-67614200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr14:67591400-67640000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr14:67592200-67618400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr14:67592400-67609200 Weak transcription Left Ventricle heart
40 chr14:67592400-67612800 Weak transcription Adipose Nuclei Adipose
41 chr14:67593400-67599600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr14:67596800-67598800 Strong transcription Liver Liver
43 chr14:67597000-67605400 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr14:67597400-67599000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr14:67597400-67609600 Weak transcription Ovary ovary
46 chr14:67597400-67616200 Weak transcription Fetal Brain Female brain
47 chr14:67597600-67600400 Weak transcription Fetal Kidney kidney
48 chr14:67598000-67601200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr14:67598000-67609800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr14:67598200-67609400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015