Variant report

Variant	rs17106203
Chromosome Location	chr14:69194500-69194501
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69193054..69195600-chr14:69237307..69239865,2	K562	blood:
2	chr14:69192535..69194951-chr14:69208491..69210248,2	K562	blood:
3	chr14:69193445..69195647-chr14:69250713..69253431,2	MCF-7	breast:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10138752	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10483821	0.90[AFR][1000 genomes]
rs11622758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623906	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11625565	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626345	0.90[AFR][1000 genomes]
rs11626392	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106198	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55687730	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55867915	0.98[EUR][1000 genomes]
rs55929214	0.98[EUR][1000 genomes]
rs56167327	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985011	0.82[EUR][1000 genomes]
rs7152463	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015093	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015388	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015998	0.89[AFR][1000 genomes]
rs8016115	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8019389	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
2	chr14:69181000-69195200	Weak transcription	Spleen	Spleen
3	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr14:69187400-69200000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr14:69187800-69199400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr14:69189800-69194600	Weak transcription	Adipose Nuclei	Adipose
7	chr14:69189800-69196200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr14:69190000-69194600	Weak transcription	Left Ventricle	heart
9	chr14:69190000-69194600	Weak transcription	Pancreas	Pancrea
10	chr14:69190000-69194800	Weak transcription	Fetal Heart	heart
11	chr14:69191000-69194800	Weak transcription	Small Intestine	intestine
12	chr14:69191000-69195200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr14:69191000-69195200	Weak transcription	Primary B cells from cord blood	blood
14	chr14:69191800-69195200	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr14:69192000-69194600	Weak transcription	Fetal Muscle Trunk	muscle
16	chr14:69192000-69194800	Weak transcription	Duodenum Mucosa	Duodenum
17	chr14:69193000-69200800	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr14:69193800-69197400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr14:69194000-69195800	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr14:69194200-69194600	Enhancers	HepG2	liver
21	chr14:69194200-69195600	Enhancers	Sigmoid Colon	Sigmoid Colon
22	chr14:69194200-69195800	Enhancers	Liver	Liver
23	chr14:69194200-69196000	Enhancers	Fetal Intestine Large	intestine
24	chr14:69194200-69196600	Enhancers	Rectal Mucosa Donor 31	rectum
25	chr14:69194200-69196800	Enhancers	HUVEC	blood vessel
26	chr14:69194200-69199200	Enhancers	Fetal Muscle Leg	muscle
27	chr14:69194400-69194600	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr14:69194400-69194600	Flanking Active TSS	K562	blood
29	chr14:69194400-69195000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr14:69194400-69195000	Enhancers	Fetal Stomach	stomach
31	chr14:69194400-69195200	Enhancers	A549	lung
32	chr14:69194400-69195600	Enhancers	Fetal Kidney	kidney
33	chr14:69194400-69195600	Enhancers	Fetal Lung	lung
34	chr14:69194400-69196600	Enhancers	Fetal Intestine Small	intestine
35	chr14:69194400-69196600	Enhancers	Stomach Mucosa	stomach
36	chr14:69194400-69198000	Enhancers	Primary B cells from peripheral blood	blood

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