The 2.0 version of rSNPBase

Variant report

Variant rs17108130
Chromosome Location chr11:108387870-108387871
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108370400-108408800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:108371800-108406400 Weak transcription Gastric stomach
3 chr11:108372000-108401200 Weak transcription Esophagus oesophagus
4 chr11:108379800-108389200 Strong transcription Placenta Placenta
5 chr11:108381000-108408800 Weak transcription Duodenum Mucosa Duodenum
6 chr11:108382000-108396000 Weak transcription Pancreas Pancrea
7 chr11:108383000-108398400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr11:108384000-108390600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr11:108384200-108389200 Strong transcription NHEK skin
10 chr11:108384800-108393000 Weak transcription GM12878-XiMat blood
11 chr11:108385000-108389600 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr11:108385000-108409000 Weak transcription Fetal Kidney kidney
13 chr11:108385000-108414000 Weak transcription HSMM muscle
14 chr11:108385000-108422800 Weak transcription Fetal Intestine Small intestine
15 chr11:108385200-108396200 Weak transcription Rectal Smooth Muscle rectum
16 chr11:108385200-108403600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr11:108385400-108389000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:108385400-108389800 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr11:108385400-108391800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:108385400-108394800 Weak transcription Placenta Amnion Placenta Amnion
21 chr11:108385400-108395600 Weak transcription Lung lung
22 chr11:108385400-108409200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr11:108385600-108388600 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:108385600-108389800 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr11:108385600-108390400 Weak transcription H1 Cell Line embryonic stem cell
26 chr11:108385600-108391000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr11:108385600-108392000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr11:108385600-108396000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr11:108385600-108396400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:108385600-108397000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr11:108385600-108397000 Weak transcription K562 blood
32 chr11:108385600-108402600 Weak transcription Brain Anterior Caudate brain
33 chr11:108385600-108405000 Weak transcription HMEC breast
34 chr11:108385600-108405200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:108385600-108408400 Weak transcription Aorta Aorta
36 chr11:108385600-108408800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr11:108385600-108409400 Weak transcription H9 Cell Line embryonic stem cell
38 chr11:108385600-108412400 Weak transcription HSMMtube muscle
39 chr11:108387000-108390400 Strong transcription Liver Liver
40 chr11:108387600-108394400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015