Variant report

Variant	rs17110726
Chromosome Location	chr14:80996067-80996068
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17110737	0.87[ASW][hapmap];0.88[YRI][hapmap]
rs17530060	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17110726	C14orf145	cis	multi-tissue	Pritchard

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80951800-81003000	Weak transcription	Psoas Muscle	Psoas
2	chr14:80962200-80997800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr14:80978600-81006600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr14:80980600-81001600	Weak transcription	Fetal Lung	lung
5	chr14:80982200-80996600	Weak transcription	Primary T cells from cord blood	blood
6	chr14:80982800-81002800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr14:80983000-81001600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:80984400-81000600	Weak transcription	Thymus	Thymus
9	chr14:80988000-80997200	Weak transcription	Duodenum Mucosa	Duodenum
10	chr14:80989800-80998000	Weak transcription	HSMM	muscle
11	chr14:80990800-81001800	Weak transcription	A549	lung
12	chr14:80990800-81002800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr14:80992600-80998400	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr14:80993400-80998800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr14:80993600-80999200	Weak transcription	Fetal Thymus	thymus
16	chr14:80995000-80997800	Strong transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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