Variant report

Variant	rs17119530
Chromosome Location	chr14:84502909-84502910
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11844203	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11846485	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11847648	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11851449	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11851578	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17119456	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17119545	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119546	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119553	0.91[EUR][1000 genomes]
rs17119555	0.92[EUR][1000 genomes]
rs17727999	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs41407845	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57196167	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60773969	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7140245	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72701037	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72701046	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84502200-84504400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr14:84502400-84504200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr14:84502600-84503400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr14:84502600-84503600	Enhancers	Primary hematopoietic stem cells	blood
5	chr14:84502600-84504200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr14:84502800-84503200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr14:84502800-84503400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr14:84502800-84503800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr14:84502800-84504200	Enhancers	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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