Variant report

Variant rs17125880
Chromosome Location chr12:51905608-51905609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51854600-51914200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr12:51855200-51906000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr12:51865600-51914600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr12:51867600-51906000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr12:51869600-51907400 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr12:51870000-51912600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr12:51889600-51907400 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr12:51891400-51907200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr12:51897800-51906400 Weak transcription Placenta Amnion Placenta Amnion
10 chr12:51898400-51906000 Strong transcription Fetal Brain Female brain
11 chr12:51899400-51906400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:51899400-51907600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr12:51899600-51914200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr12:51900000-51906400 Weak transcription Stomach Mucosa stomach
15 chr12:51900400-51907200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr12:51900400-51912600 Weak transcription Primary B cells from peripheral blood blood
17 chr12:51900800-51906400 Strong transcription Brain Hippocampus Middle brain
18 chr12:51901400-51906400 Strong transcription Brain Germinal Matrix brain
19 chr12:51902000-51905800 Weak transcription Brain Anterior Caudate brain
20 chr12:51902400-51918200 Weak transcription Pancreas Pancrea
21 chr12:51903600-51906200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr12:51903600-51925600 Weak transcription Fetal Brain Male brain
23 chr12:51903800-51913000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:51904000-51914200 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr12:51904200-51906400 Strong transcription Brain Inferior Temporal Lobe brain
26 chr12:51904400-51906400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:51904400-51906800 Strong transcription Brain Substantia Nigra brain
28 chr12:51904600-51906200 Strong transcription Brain Cingulate Gyrus brain
29 chr12:51904800-51907000 Strong transcription Brain Angular Gyrus brain
30 chr12:51905000-51914000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr12:51905200-51913800 Weak transcription Dnd41 blood
32 chr12:51905400-51914200 Weak transcription Primary T cells from cord blood blood

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