Variant report

Variant rs17138450
Chromosome Location chr7:17962848-17962849
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:17911400-17977400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr7:17952800-17964400 Weak transcription Gastric stomach
3 chr7:17953000-17963000 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr7:17953200-17964600 Weak transcription Esophagus oesophagus
5 chr7:17955000-17977400 Weak transcription Fetal Intestine Small intestine
6 chr7:17955200-17964000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr7:17955200-17966200 Weak transcription Pancreas Pancrea
8 chr7:17955400-17967000 Weak transcription Lung lung
9 chr7:17955400-17973000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr7:17959000-17971400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr7:17959600-17972800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr7:17960200-17964400 Enhancers Primary T helper cells PMA-I stimulated --
13 chr7:17960800-17963400 Enhancers Primary T helper cells fromperipheralblood blood
14 chr7:17960800-17964400 Weak transcription Psoas Muscle Psoas
15 chr7:17960800-17965000 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr7:17960800-17965600 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr7:17960800-17967800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr7:17960800-17970200 Weak transcription Primary T cells fromperipheralblood blood
19 chr7:17961000-17964200 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr7:17961000-17971200 Weak transcription Primary T cells from cord blood blood
21 chr7:17961200-17963400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr7:17961200-17963400 Enhancers Colon Smooth Muscle Colon
23 chr7:17961600-17964200 Enhancers HUES6 Cell Line embryonic stem cell
24 chr7:17961800-17963000 Weak transcription Brain Anterior Caudate brain
25 chr7:17961800-17963000 Weak transcription Brain Hippocampus Middle brain
26 chr7:17961800-17963000 Weak transcription Brain Substantia Nigra brain
27 chr7:17961800-17963200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr7:17961800-17977400 Weak transcription Brain Angular Gyrus brain
29 chr7:17961800-17978800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr7:17962000-17963000 Weak transcription H9 Cell Line embryonic stem cell
31 chr7:17962000-17963000 Weak transcription Left Ventricle heart
32 chr7:17962000-17963000 Weak transcription Ovary ovary
33 chr7:17962000-17963000 Weak transcription Right Atrium heart
34 chr7:17962000-17963000 Weak transcription Stomach Smooth Muscle stomach
35 chr7:17962000-17963200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr7:17962000-17967600 Weak transcription Small Intestine intestine
37 chr7:17962000-17970200 Weak transcription Primary B cells from peripheral blood blood
38 chr7:17962000-17970200 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr7:17962000-17973400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr7:17962000-17975800 Weak transcription Hela-S3 cervix
41 chr7:17962200-17963000 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr7:17962200-17964000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr7:17962200-17973200 Weak transcription Primary B cells from cord blood blood
44 chr7:17962200-17977400 Weak transcription Brain Cingulate Gyrus brain
45 chr7:17962400-17963200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr7:17962400-17963200 Weak transcription Fetal Heart heart
47 chr7:17962400-17963400 Enhancers Duodenum Smooth Muscle Duodenum
48 chr7:17962400-17964400 Enhancers HUES48 Cell Line embryonic stem cell
49 chr7:17962400-17978600 Weak transcription Aorta Aorta
50 chr7:17962600-17963000 Weak transcription Pancreatic Islets Pancreatic Islet

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