The 2.0 version of rSNPBase

Variant report

Variant rs1714021
Chromosome Location chr4:57934813-57934814
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57899600-57942200 Weak transcription Primary hematopoietic stem cells blood
2 chr4:57918600-57936800 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr4:57923800-57937200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr4:57927000-57937400 Weak transcription Small Intestine intestine
5 chr4:57929600-57944400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr4:57930800-57937400 Weak transcription Fetal Kidney kidney
7 chr4:57931200-57936000 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr4:57931200-57936600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr4:57931200-57937000 Weak transcription Brain Cingulate Gyrus brain
10 chr4:57931600-57940600 Weak transcription Hela-S3 cervix
11 chr4:57931800-57938800 Weak transcription Pancreas Pancrea
12 chr4:57932000-57935800 Strong transcription NHEK skin
13 chr4:57932200-57935200 Weak transcription Aorta Aorta
14 chr4:57932200-57935200 Weak transcription Fetal Muscle Trunk muscle
15 chr4:57932200-57935200 Weak transcription Fetal Muscle Leg muscle
16 chr4:57932200-57935400 Weak transcription Lung lung
17 chr4:57932400-57935000 Weak transcription Colon Smooth Muscle Colon
18 chr4:57932400-57935200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:57932400-57935800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr4:57932400-57936000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr4:57932400-57936800 Weak transcription Brain Hippocampus Middle brain
22 chr4:57932400-57945600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr4:57932400-57947600 Genic enhancers Osteobl bone
24 chr4:57932600-57935000 Weak transcription Psoas Muscle Psoas
25 chr4:57932600-57935000 Weak transcription Right Ventricle heart
26 chr4:57932600-57935200 Weak transcription Ovary ovary
27 chr4:57932600-57935200 Weak transcription Spleen Spleen
28 chr4:57932600-57936000 Enhancers A549 lung
29 chr4:57932600-57936600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr4:57932600-57936800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr4:57932600-57936800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr4:57932600-57937200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr4:57932600-57937200 Weak transcription Adipose Nuclei Adipose
34 chr4:57932600-57937200 Weak transcription Fetal Intestine Large intestine
35 chr4:57932600-57937600 Weak transcription Stomach Smooth Muscle stomach
36 chr4:57932600-57944000 Weak transcription Fetal Stomach stomach
37 chr4:57932800-57936600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr4:57934200-57935200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr4:57934200-57935600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:57934200-57935600 Genic enhancers HSMMtube muscle
41 chr4:57934200-57935800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr4:57934200-57935800 Enhancers Fetal Heart heart
43 chr4:57934200-57936200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr4:57934200-57936200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr4:57934200-57936200 Enhancers Left Ventricle heart
46 chr4:57934400-57935200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr4:57934400-57935200 Enhancers NHDF-Ad bronchial
48 chr4:57934400-57936200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr4:57934400-57951600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr4:57934600-57935000 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015