Variant report

Variant	rs17150469
Chromosome Location	chr8:9637318-9637319
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6601384	1.00[CHD][hapmap];0.89[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530864	chr8:9097498-9914548	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9566000-9639400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr8:9570000-9638600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr8:9603000-9638800	Weak transcription	Stomach Mucosa	stomach
4	chr8:9623800-9638800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr8:9626200-9638800	Weak transcription	Small Intestine	intestine
6	chr8:9626400-9640000	Weak transcription	Gastric	stomach
7	chr8:9627800-9638400	Weak transcription	Fetal Brain Male	brain
8	chr8:9628000-9637400	Weak transcription	K562	blood
9	chr8:9628200-9638800	Weak transcription	Psoas Muscle	Psoas
10	chr8:9628200-9640000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:9628200-9640200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:9628400-9638000	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr8:9628400-9638000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr8:9628400-9638800	Weak transcription	Rectal Smooth Muscle	rectum
15	chr8:9628600-9640400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr8:9628800-9638000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr8:9628800-9639000	Weak transcription	Fetal Kidney	kidney
18	chr8:9628800-9639200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr8:9629200-9638000	Weak transcription	Brain Angular Gyrus	brain
20	chr8:9632000-9637400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr8:9632200-9637600	Strong transcription	Cortex derived primary cultured neurospheres	brain
22	chr8:9633400-9637400	Strong transcription	HUES6 Cell Line	embryonic stem cell
23	chr8:9633400-9637400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr8:9633400-9637400	Strong transcription	Fetal Intestine Large	intestine
25	chr8:9633400-9637400	Strong transcription	Monocytes-CD14+_RO01746	blood
26	chr8:9633600-9637400	Strong transcription	Primary hematopoietic stem cells	blood
27	chr8:9633800-9637400	Strong transcription	Duodenum Smooth Muscle	Duodenum
28	chr8:9634000-9637400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr8:9634000-9637400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
30	chr8:9634000-9637400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr8:9634000-9637800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr8:9634200-9638000	Weak transcription	NHLF	lung
33	chr8:9634200-9638600	Strong transcription	HSMM	muscle
34	chr8:9634400-9637400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr8:9634400-9637600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr8:9634400-9637800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr8:9634400-9640000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr8:9634400-9640000	Weak transcription	Osteobl	bone
39	chr8:9634400-9641600	Weak transcription	Aorta	Aorta
40	chr8:9634800-9639000	Weak transcription	Fetal Heart	heart
41	chr8:9634800-9641600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr8:9635200-9637800	Weak transcription	Hela-S3	cervix
43	chr8:9635200-9638200	Weak transcription	Fetal Intestine Small	intestine
44	chr8:9635200-9638800	Weak transcription	A549	lung
45	chr8:9635200-9640200	Weak transcription	Lung	lung
46	chr8:9635400-9637400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr8:9635400-9637400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr8:9635400-9637600	Weak transcription	Primary T helper cells PMA-I stimulated	--
49	chr8:9635400-9637800	Weak transcription	Colonic Mucosa	Colon
50	chr8:9635400-9637800	Weak transcription	Pancreatic Islets	Pancreatic Islet

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