Variant report

Variant	rs17151643
Chromosome Location	chr7:78532094-78532095
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17469166	1.00[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464598	chr7:78492642-79483480	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv607659	chr7:78492642-79483480	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:78531400-78532400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:78531800-78532400	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr7:78531800-78532400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr7:78531800-78532400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr7:78532000-78532400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr7:78532000-78532400	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr7:78532000-78532400	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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