Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:25979383..25981909-chr7:26003195..26005485,2	MCF-7	breast:
2	chr7:25990548..25994647-chr7:26001939..26005377,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
2	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	nsv606432	chr7:25988185-26223294	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
4	nsv887848	chr7:26000137-26059739	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26002800-26007200	Weak transcription	Spleen	Spleen
2	chr7:26002800-26009000	Weak transcription	Right Atrium	heart
3	chr7:26003400-26005200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
4	chr7:26003400-26005600	Flanking Active TSS	GM12878-XiMat	blood
5	chr7:26003800-26005000	Enhancers	Rectal Mucosa Donor 29	rectum
6	chr7:26003800-26005600	Enhancers	Fetal Lung	lung
7	chr7:26004000-26005000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr7:26004000-26005000	Enhancers	Fetal Thymus	thymus
9	chr7:26004000-26005200	Enhancers	Pancreas	Pancrea
10	chr7:26004000-26005200	Enhancers	Rectal Mucosa Donor 31	rectum
11	chr7:26004400-26005000	Bivalent Enhancer	Hela-S3	cervix
12	chr7:26004400-26005200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr7:26004400-26005200	Enhancers	Fetal Muscle Leg	muscle
14	chr7:26004600-26005000	Enhancers	Stomach Mucosa	stomach
15	chr7:26004600-26005000	Enhancers	NHEK	skin
16	chr7:26004600-26005200	Bivalent Enhancer	Duodenum Mucosa	Duodenum
17	chr7:26004800-26005000	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr7:26004800-26005000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr7:26004800-26005200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr7:26004800-26005400	Enhancers	Liver	Liver
21	chr7:26004800-26007200	Weak transcription	Gastric	stomach

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