The 2.0 version of rSNPBase

Variant report

Variant rs17154494
Chromosome Location chr7:80444528-80444529
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:80410400-80462400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr7:80417600-80456600 Weak transcription Fetal Brain Female brain
3 chr7:80425200-80460000 Weak transcription Psoas Muscle Psoas
4 chr7:80425400-80480200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr7:80427400-80451400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr7:80427400-80483800 Weak transcription Fetal Muscle Trunk muscle
7 chr7:80431000-80459800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr7:80434400-80446200 Weak transcription Fetal Intestine Large intestine
9 chr7:80434400-80451400 Weak transcription HSMMtube muscle
10 chr7:80434800-80445200 Weak transcription Primary monocytes fromperipheralblood blood
11 chr7:80435000-80445000 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr7:80436400-80459000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr7:80436800-80456200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr7:80437000-80445800 Weak transcription Stomach Smooth Muscle stomach
15 chr7:80437000-80453400 Weak transcription Colon Smooth Muscle Colon
16 chr7:80437000-80453600 Weak transcription NH-A brain
17 chr7:80437200-80453600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr7:80438000-80446600 Weak transcription Primary hematopoietic stem cells blood
19 chr7:80438200-80445000 Weak transcription Hela-S3 cervix
20 chr7:80438200-80446400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr7:80438200-80451800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr7:80438200-80453800 Weak transcription Rectal Smooth Muscle rectum
23 chr7:80438800-80445000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr7:80439200-80446200 Weak transcription Fetal Lung lung
25 chr7:80439400-80445200 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr7:80439400-80447400 Weak transcription Osteobl bone
27 chr7:80439400-80456200 Weak transcription Adipose Nuclei Adipose
28 chr7:80439400-80463200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr7:80440000-80460400 Weak transcription Fetal Muscle Leg muscle
30 chr7:80441200-80447000 Strong transcription HSMM muscle
31 chr7:80442800-80447000 Strong transcription HMEC breast
32 chr7:80443400-80445200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr7:80443800-80444600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:80443800-80444600 Strong transcription NHLF lung
35 chr7:80443800-80445000 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr7:80443800-80445200 Strong transcription A549 lung
37 chr7:80443800-80445600 Strong transcription NHEK skin
38 chr7:80443800-80446000 Weak transcription Fetal Intestine Small intestine
39 chr7:80443800-80446200 Strong transcription NHDF-Ad bronchial
40 chr7:80443800-80447000 Strong transcription Muscle Satellite Cultured Cells --
41 chr7:80443800-80447800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr7:80444000-80446400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr7:80444400-80450600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015