Variant report

Variant	rs17154509
Chromosome Location	chr10:44350731-44350732
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr10:44350729-44351760	SK-N-SH	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44345365..44347764-chr10:44350017..44351767,2	K562	blood:
2	chr10:44350570..44352669-chr10:44352743..44355459,2	K562	blood:

Variant related genes	Relation type
LINC00840	TF binding region
ENSG00000226808	Chromatin interaction

rs_ID	r²[population]
rs7903836	1.00[AMR][1000 genomes]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44340800-44357600	Weak transcription	Aorta	Aorta
2	chr10:44343000-44352400	Weak transcription	HUVEC	blood vessel
3	chr10:44346600-44350800	Enhancers	Placenta	Placenta
4	chr10:44346600-44353000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr10:44347200-44351800	Enhancers	Placenta Amnion	Placenta Amnion
6	chr10:44348400-44352600	Weak transcription	Fetal Brain Female	brain
7	chr10:44348600-44350800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr10:44348600-44351200	Weak transcription	Pancreas	Pancrea
9	chr10:44348600-44352600	Weak transcription	Fetal Brain Male	brain
10	chr10:44349200-44352000	Enhancers	Fetal Heart	heart
11	chr10:44349600-44352600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr10:44349600-44353000	Enhancers	Left Ventricle	heart
13	chr10:44349800-44351200	Weak transcription	Fetal Muscle Leg	muscle
14	chr10:44349800-44351400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr10:44349800-44352600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr10:44350000-44351200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr10:44350000-44352000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr10:44350000-44352400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr10:44350000-44352600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr10:44350000-44352600	Weak transcription	NHLF	lung
21	chr10:44350000-44352600	Weak transcription	Osteobl	bone
22	chr10:44350200-44351000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr10:44350200-44351000	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr10:44350200-44351200	Weak transcription	Adipose Nuclei	Adipose
25	chr10:44350200-44351400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr10:44350200-44352600	Weak transcription	HSMM	muscle
27	chr10:44350200-44352600	Weak transcription	HSMMtube	muscle
28	chr10:44350400-44351200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
29	chr10:44350400-44352600	Weak transcription	Hela-S3	cervix
30	chr10:44350600-44350800	Weak transcription	Right Atrium	heart
31	chr10:44350600-44351000	Weak transcription	NHDF-Ad	bronchial

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